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AT3G25510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.826
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : disease resistance protein (TIR-NBS-LRR class), putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: epidermis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class) (TAIR:AT1G69550.1); Has 89074 Blast hits to 29960 proteins in 1009 species: Archae - 52; Bacteria - 3819; Metazoa - 7735; Fungi - 613; Plants - 72271; Viruses - 24; Other Eukaryotes - 4560 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:ENOG410J606EMBL:CP002686EnsemblPlants:AT3G25510
EnsemblPlants:AT3G25510.1entrez:822137Gene3D:3.40.50.10140Gene3D:3.40.50.300
Gene3D:3.80.10.10GeneID:822137GO:GO:0005524GO:GO:0007165
GO:GO:0043531Gramene:AT3G25510.1hmmpanther:PTHR11017hmmpanther:PTHR11017:SF20
InParanoid:F4J910InterPro:IPR000157InterPro:IPR002182InterPro:IPR003593
InterPro:IPR011713InterPro:IPR011991InterPro:IPR027417InterPro:IPR032675
KEGG:ath:AT3G25510ncoils:CoilOMA:TNLWRLDPaxDb:F4J910
Pfam:PF00931Pfam:PF01582Pfam:PF07725Pfscan:PS50104
PRIDE:F4J910PROSITE:PS50104ProteinModelPortal:F4J910Proteomes:UP000006548
RefSeq:NP_189178.1SMART:SM00255SMART:SM00382STRING:3702.AT3G25510.1
SUPFAM:SSF46785SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF52200
SUPFAM:SSF52540TAIR:AT3G25510UniGene:At.37375UniProt:F4J910
Coordinates (TAIR10) chr3:-:9260838..9268797
Molecular Weight (calculated) 223585.00 Da
IEP (calculated) 6.96
GRAVY (calculated) -0.12
Length 1981 amino acids
Sequence (TAIR10)
(BLAST)
0001: MNSSFFLGTL AAAIGFLTLL KKFKFQQDNR EDDSASLSPS SVPPSSLSRT WKHQVFPSFH GADVRKTFLS HVLEAFRGKG IDPFIDNSIE RSKSIGPELV
0101: EAIRGSRIAI VLLSRNYASS SWCMNELVEI MKCKEDLGQI VITIFYEVDP THIKKQTGDF GKVFKETCKG KTKEEIKRWR KALEGVATIA GYHSSNWDFE
0201: ALIGMGAHME NMRALLRLDL DDVRMIGIWG PPGIGKTTIA RFLLSQVSKS FQLSTIMVNI KECYPSPCLD EYSVQLQLQN KMLSKMINQK DIMIPHLGVA
0301: QERLKDKKVF LVLDDVDQLG QLDALAKETR WFGPGSRIII TTENLRLLMA HRINHIYKVE FSSTDEAFQI FCMHAFGQKH PYNGFYELSR EVTELAGGLP
0401: LGLKVMGSSL RGMSKQEWKR TLPRLRTCLD GKIESILMFS YEALSHEDKD LFLCIACFFN YQKIKKVEKH LADRFLDVRQ GLYVLAEKSL IHIGTGATEM
0501: HTLLVQLGRE IAHTQSTNDP RKSLFLVDER EICEALSDET MDSSRRIIGM DFDLSKNGEE VTNISEKGLQ RMSNLQFIRF DGRSCARHSS NLTVVRSSDN
0601: NCAHPDTVNA LQDLNYQFQE IRLLHWINFR RLCLPSTFNP EFLVELNMPS STCHTLWEGS KALRNLKWMD LSYSISLKEL PDLSTATNLE ELILKYCVSL
0701: VKVPSCVGKL GKLQVLCLHG CTSILELPSF TKNVTGLQSL DLNECSSLVE LPSSIGNAIN LQNLDLGCLR LLKLPLSIVK FTNLKKFILN GCSSLVELPF
0801: MGNATNLQNL DLGNCSSLVE LPSSIGNAIN LQNLDLSNCS SLVKLPSFIG NATNLEILDL RKCSSLVEIP TSIGHVTNLW RLDLSGCSSL VELPSSVGNI
0901: SELQVLNLHN CSNLVKLPSS FGHATNLWRL DLSGCSSLVE LPSSIGNITN LQELNLCNCS NLVKLPSSIG NLHLLFTLSL ARCQKLEALP SNINLKSLER
1001: LDLTDCSQFK SFPEISTNIE CLYLDGTAVE EVPSSIKSWS RLTVLHMSYF EKLKEFSHVL DIITWLEFGE DIQEVAPWIK EISRLHGLRL YKCRKLLSLP
1101: QLPESLSIIN AEGCESLETL DCSYNNPLSL LNFAKCFKLN QEARDFIIQI PTSNDAVLPG AEVPAYFTHR ATTGASLTIK LNERPISTSM RFKACIVLIK
1201: CDNDEAGDDG SSLMVHVDIM DKQNGLSVPY SPGIYTIYPL LTEHLYIFQG EAEESLQVDA YDDSFNEALM KEFQRKGITP FNDNEIKRGE SISPELVLAI
1301: RGSRIALILL SRNYASSSWC LDELAEIIKC REEFGQTVMV VFYKVDPSDI KKLTGDFGSV FRKTCAGKTN EDTRRWIQAL AKVATLAGYV SNNWDNEAVM
1401: IEKIATDISN KLNKSTPSRD FDELVGMGAH MERMELLLCL DSDEVRMIGI WGPSGIGKTT IARFLFSQFS DSFELSAFME NIKELMYRKP VCSDDYSAKL
1501: HLQNQFMSQI INHMDVEVPH LGVVENRLND KKVLIVLDNI DQSMQLDAIA KETRWFGHGS RIIITTQDQK LLKAHGINHI YKVDYPSTHE ACQIFCMSAV
1601: GKKFPKDEFQ ELALEVTNLL GNLPLGLRVM GSHFRGMSKQ EWINALPRLR THLDSNIQSI LKFSYDALCR EDKDLFLHIA CTFNNKRIEN VEAHLTHKFL
1701: DTKQRFHVLA EKSLISIEEG WIKMHNLLEL LGREIVCHEH ESIREPGKRQ FLVDARDICE VLTDDTGSKS VVGIYFNSAE LLGELNISER AFEGMSNLKF
1801: LRIKCDRSDK MYLPRGLKYI SRKLRLLEWD RFPLTCLPSN FCTEYLVELN MRHSKLVKLW EGNLSLGNLK WMNLFHSKNL KELPDFSTAT NLQTLILCGC
1901: SSLVELPYSI GSANNLQKLH LCRCTSLVEL PASIGNLHKL QNVTLKGCSK LEVVPTNINL ILDVKKYKNR ENRGLCSKKE I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)