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AT3G15650.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.908
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1); Has 2036 Blast hits to 2021 proteins in 596 species: Archae - 6; Bacteria - 783; Metazoa - 348; Fungi - 280; Plants - 199; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G15650-MONOMEREMBL:AB017071EMBL:AK175863EMBL:AK220839
EMBL:BT010417EMBL:CP002686EnsemblPlants:AT3G15650EnsemblPlants:AT3G15650.1
entrez:820808ESTHER:arath-Q9LW14ExpressionAtlas:Q9LW14Gene3D:3.40.50.1820
GeneID:820808GO:GO:0016787Gramene:AT3G15650.1hmmpanther:PTHR10655
hmmpanther:PTHR10655:SF34HOGENOM:HOG000260139InterPro:IPR003140InterPro:IPR029058
MEROPS:S09.A55Pfam:PF02230PhylomeDB:Q9LW14Proteomes:UP000006548
RefSeq:NP_188186.1SMR:Q9LW14SUPFAM:SSF53474TAIR:AT3G15650
UniGene:At.39010UniGene:At.39011UniProt:Q9LW14
Coordinates (TAIR10) chr3:+:5306006..5307764
Molecular Weight (calculated) 27590.80 Da
IEP (calculated) 8.10
GRAVY (calculated) -0.15
Length 255 amino acids
Sequence (TAIR10)
(BLAST)
001: MSYSRQSMGS GSRSTRGYEF GRTYVVRPKG KHQATIVWLH GLGDNGSSSS QLLESLPLPN IKWICPTAPS RPVSLLGGFP CTAWFDVGEI SEDLHDDIEG
101: LDASAAHIAN LLSAEPTDVK VGIGGFSMGA AIALYSTTCY ALGRYGTGHA YTINLRATVG LSGWLPGWRS LRSKIESSNE VARRAASIPI LLAHGTSDDV
201: VPYRFGEKSA HSLAMAGFRQ TMFKPYEGLG HYTVPKEMDE VVHWLVSRLG LEGSR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)