suba logo
AT5G58690.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.854
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphatidylinositol-speciwc phospholipase C5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphatidylinositol-speciwc phospholipase C5 (PLC5); FUNCTIONS IN: phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity, calcium ion binding; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), EF-hand-like domain (InterPro:IPR011992), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT2G40116.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G58690-MONOMERBRENDA:3.1.4.11EC:3.1.4.11eggNOG:ENOG410XPSW
eggNOG:KOG0169EMBL:AB020755EMBL:AF434167EMBL:AY062681
EMBL:BT010399EMBL:CP002688EnsemblPlants:AT5G58690EnsemblPlants:AT5G58690.1
entrez:835983Gene3D:1.10.238.10Gene3D:2.60.40.150Gene3D:3.20.20.190
GeneID:835983Genevisible:Q944C2GO:GO:0004435GO:GO:0004871
GO:GO:0005829GO:GO:0005886GO:GO:0016042GO:GO:0035556
Gramene:AT5G58690.1gramene_pathway:3.1.4.11gramene_pathway:LIPASYN-PWYhmmpanther:PTHR10336
hmmpanther:PTHR10336:SF92HOGENOM:HOG000244119InParanoid:Q944C2InterPro:IPR000008
InterPro:IPR000909InterPro:IPR001192InterPro:IPR001711InterPro:IPR011992
InterPro:IPR015359InterPro:IPR017946KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11
KEGG:ath:AT5G58690KO:K05857OMA:MPEKDDFPANTHER:PTHR10336
PaxDb:Q944C2Pfam:PF00168Pfam:PF00387Pfam:PF00388
Pfam:PF09279Pfam:Q944C2Pfscan:PS50004Pfscan:PS50007
Pfscan:PS50008PhylomeDB:Q944C2PRIDE:Q944C2PRINTS:PR00390
PRO:PR:Q944C2PROSITE:PS50004PROSITE:PS50007PROSITE:PS50008
ProteinModelPortal:Q944C2Proteomes:UP000006548Reactome:R-ATH-114604Reactome:R-ATH-1855204
Reactome:R-ATH-202433Reactome:R-ATH-399997Reactome:R-ATH-416476Reactome:R-ATH-434316
Reactome:R-ATH-5607764RefSeq:NP_200677.2SMART:SM00148SMART:SM00149
SMART:SM00239SMR:Q944C2STRING:3702.AT5G58690.1SUPFAM:SSF47473
SUPFAM:SSF49562SUPFAM:SSF51695TAIR:AT5G58690tair10-symbols:ATPLC5
tair10-symbols:PLC5UniGene:At.27264UniProt:Q944C2
Coordinates (TAIR10) chr5:-:23709676..23712030
Molecular Weight (calculated) 66256.30 Da
IEP (calculated) 7.36
GRAVY (calculated) -0.52
Length 578 amino acids
Sequence (TAIR10)
(BLAST)
001: MKRDMGSYKM GLCCSDKLRM NRGAPPQDVV TAFVEYTEGR SHMTAEQLCR FLVEVQDETE VLVSDAEKII ERITCERHHI TKFLRHTLNL DDFFSFLFSD
101: DLNHPIDSKV HQDMASPLSH YFIYTSHNSY LTGNQINSEC SDVPLIKALK RGVRALELDM WPNSTKDDIL VLHGWAWTPP VELVKCLRSI KEHAFYASAY
201: PVILTLEDHL TPDLQAKAAE MMKEIFMDMV YFPEAGGLKE FPSPEDLKYK IVISTKPPKG SLRKDKDSES DASGKASSDV SADDEKTEEE TSEAKNEEDG
301: FDQESSNLDF LTYSRLITIP SGNAKNGLKE ALTIDNGGVR RLSLREQKFK KATEMYGTEV IKFTQKNLLR IYPKATRVNS SNYRPYNGWM YGAQMVAFNM
401: QGYGRALWMM HGMFRGNGGC GYVKKPDFMM NNNLSGEVFN PKAKLPIKKT LKVKVYMGKG WDSGFQRTCF NTWSSPNFYT RVGITGVRGD KVMKKTKKEQ
501: KTWEPFWNEE FEFQLTVPEL ALLRIEVHDY NMPEKDDFSG QTCLPVSELR QGIRSVPLYD RKGERLVSVT LLMRFHFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)