AT4G24450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.967 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphoglucan, water dikinase | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
phosphoglucan, water dikinase (PWD); FUNCTIONS IN: kinase activity, ATP binding; INVOLVED IN: phosphorylation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); BEST Arabidopsis thaliana protein match is: Pyruvate phosphate dikinase, PEP/pyruvate binding domain (TAIR:AT1G10760.1); Has 1897 Blast hits to 1851 proteins in 785 species: Archae - 196; Bacteria - 1373; Metazoa - 4; Fungi - 3; Plants - 225; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12635761..12642631 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 144820.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.65 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1278 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MATSKSQQFQ LIEGMELQIT VTGLPNGSSV RAEFHLKNCT RAWILHWGCI YQGNNHWYIP SEHSSKQGAL QTTFVKSGDA YVVILELRDP RVRAIEFVLK 0101: DGSHNRWLRQ HNGNFRVEIP WNDLHAHHRI PKTLIERRAH KIWDRKGRPQ SSAREQQIDY DNAVRELHAE LARGISLDEL QANSTVPVEK EETSEPHHTM 0201: IQSYRRKHDV QKWLQKYTEP INRSGSVKSS ALAELSKRSV GQENLVSQKS FHVRNYEITV LQRDVKGDCR LWIATNMAGP TVLHWGVAKS SAGEWLIPPP 0301: DVLPEKSKFV HGACQTQFTD MSSREHSYQF IDINLKRGGF VGIQFVIWSG GYWVNNNGAN FVVNLKSADS TSGKLDVDEK YVLKWLLDEI SEREKEAERS 0401: LMHRFNIATE LTERCKDEGE GGCIGIMVWM RFMATRHLTW NKNYNVKPRE ISEALERFTN LMEKIYLQQP NKREIVRLTM ALVGRGGQGD VGQRIRDEIL 0501: VIQRNNHCKS GMMEEWHQKL HNNSSADDVI ICEALLNYVR SDFRIDAYWQ TLQTNGLTKE RLASYDRPIV SEPRFRSDSK EGLIRDLTMY LKTLKAVHSG 0601: ADLESAIDTF LSPSKGHHVF AVNGLSPKLQ DLLNLVKRLV REENTEPLIE KLVDARIQLH PALRAPRTRA KDLLFLDIAL ESCFKTTIEK RLISLNFNNP 0701: PEIIYVICVV LENLCLSIVN NEEIIFCTKD WYRVSEAYRP HDVQWALQTK AVLDRLQLVL ADRCQHYFTI IQPTAKYLGQ LLRVDKHGID VFTEEVIRAG 0801: PGAVLSTLVN RFDPSLRKIA NLGCWQVISS ADAYGFVVCV NELIVVQNKF YSKPTVIIAS KVTGEEEIPA GVVAVLTPSM IDVLSHVSIR ARNSKICFAT 0901: CFDQNVLSNL KSKEGRAISI HTKSTGLVIS DGNNSDVSVR HIFISSVPRG VISKGKKFCG HYVISSKEFT DERVGSKSYN IKFLRERVPS WIKIPTSAAL 1001: PFGTFENILS DDSNKDVARR ISVLKDSLNR GDLTKLKSIQ EAILQMSAPM ALRNELITKL RSERMPYLGD ESGWNRSWVA IKKVWASKWN ERAYVSCKKN 1101: KLDHDAVCMA VLIQEVICGD YAFVIHTNNP VSGDSSEIYT EIVKGLGETL VGAYPGRAMS FITKKTNLKS PTVISYPSKR IGLYSKPSII FRSDSNNEDL 1201: EGNAGAGLYD SVIMDEAEEV VVDYSREPLI MDKSFRVRLF SAIAEAGNVI ESIYGCPQDI EGVVKGGHIY IVQARPQV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)