AT2G15310.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:golgi 0.963 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : ADP-ribosylation factor B1A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor (GI:861205) (Chlamydomonas reinhardtii), other ARFs and ARF-like proteins. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
ADP-ribosylation factor B1A (ARFB1A); FUNCTIONS IN: GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: intracellular; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 16727 Blast hits to 16719 proteins in 560 species: Archae - 15; Bacteria - 32; Metazoa - 8664; Fungi - 2207; Plants - 2295; Viruses - 3; Other Eukaryotes - 3511 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:6653947..6655187 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 23081.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 10.18 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 205 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGARFSRIAK RFLPKSKVRI LMVGLDGSGK TTILYKLKLG EVVTTVPTIG FNLETVEYKG INFTVWDIGG QEKIRKLWRH YFQNAQGLIF VVDSSDSERL 101: SEARNELHRI LTDNELEGAC VLVFANKQDS RNALPVAEVA NKLGLHSLSK RCWLIQGTSA ISGQGLYEGL EWLSTTIPNK PERSTSVSSF RSDSYERKLV 201: RGPRY |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)