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AT5G05365.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.901
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Heavy metal transport/detoxification superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3); Has 886 Blast hits to 886 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 9; Plants - 876; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J3AReggNOG:ENOG410Z7ZQEMBL:AK220612EMBL:AK220937
EMBL:CP002688EnsemblPlants:AT5G05365EnsemblPlants:AT5G05365.1entrez:5008200
GeneID:5008200GO:GO:0030001GO:GO:0046872Gramene:AT5G05365.1
hmmpanther:PTHR22814hmmpanther:PTHR22814:SF60HOGENOM:HOG000038877InterPro:IPR006121
KEGG:ath:AT5G05365OMA:CDECIRKPfam:PF00403Pfscan:PS50846
PhylomeDB:Q56ZM7PROSITE:PS50846Proteomes:UP000006548RefSeq:NP_001078533.1
SUPFAM:SSF55008TAIR:AT5G05365UniGene:At.33005UniGene:At.67825
UniProt:Q56ZM7
Coordinates (TAIR10) chr5:+:1590125..1590672
Molecular Weight (calculated) 8869.76 Da
IEP (calculated) 7.26
GRAVY (calculated) -0.32
Length 77 amino acids
Sequence (TAIR10)
(BLAST)
1: MANVVELKVN LHCDECIRKI LKAIKKIEDI EAYDVDTQLN KVTVTGNVTE EQVIRVLQKV RKAAVKWDQD NQTLFTN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)