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AT3G13790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:15722471 (2005): extracellular region
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31520498 (2020): mitochondrion
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:24393051 (2015): extracellular region
  • PMID:22923678 (2012): plasma membrane
  • PMID:22550958 (2012): plastid
  • PMID:21109274 (2011): extracellular region
  • PMID:19334764 (2009): plasma membrane
  • PMID:16729891 (2006): extracellular region
  • PMID:16356755 (2006): extracellular region
  • PMID:15593128 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glycosyl hydrolases family 32 protein
Curator
Summary (TAIR10)
Encodes a protein with invertase activity.
Computational
Description (TAIR10)
ATBFRUCT1; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, beta-fructofuranosidase activity; INVOLVED IN: response to karrikin, response to wounding; LOCATED IN: cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: beta-fructofuranosidase 5 (TAIR:AT1G55120.1); Has 4230 Blast hits to 4174 proteins in 1237 species: Archae - 18; Bacteria - 2583; Metazoa - 93; Fungi - 290; Plants - 1044; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G13790-MONOMERBioCyc:ARA:GQT-2630-MONOMERBioGrid:5925BRENDA:3.2.1.26
CAZy:GH32DIP:DIP-59391NEC:3.2.1.26eggNOG:COG1621
eggNOG:KOG0228EMBL:AP001307EMBL:AY045776EMBL:AY079422
EMBL:CP002686EMBL:X74514EMBL:X74515EnsemblPlants:AT3G13790
EnsemblPlants:AT3G13790.1entrez:820591EvolutionaryTrace:Q43866ExpressionAtlas:Q43866
Gene3D:2.115.10.20Gene3D:2.60.120.560GeneID:820591Genevisible:Q43866
GO:GO:0004564GO:GO:0004575GO:GO:0005618GO:GO:0005886
GO:GO:0005975GO:GO:0009611GO:GO:0048046GO:GO:0080167
gramene_pathway:3.2.1.26gramene_pathway:PWY-621hmmpanther:PTHR31953hmmpanther:PTHR31953:SF16
HOGENOM:HOG000181427InParanoid:Q43866InterPro:IPR001362InterPro:IPR013148
InterPro:IPR013189InterPro:IPR013320InterPro:IPR018053InterPro:IPR023296
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26KEGG:ath:AT3G13790KO:K01193
OMA:CIANPPKPaxDb:Q43866PDB:2AC1PDB:2OXB
PDB:2QQUPDB:2QQVPDB:2QQWPDB:2XQR
PDBsum:2AC1PDBsum:2OXBPDBsum:2QQUPDBsum:2QQV
PDBsum:2QQWPDBsum:2XQRPfam:PF00251Pfam:PF08244
Pfam:Q43866PhylomeDB:Q43866PIR:S37212PRIDE:Q43866
PRO:PR:Q43866PROSITE:PS00609ProteinModelPortal:Q43866Proteomes:UP000006548
RefSeq:NP_001189881.1RefSeq:NP_566464.1scanprosite:PS00609SMART:SM00640
SMR:Q43866STRING:3702.AT3G13790.1SUPFAM:SSF49899SUPFAM:SSF75005
TAIR:AT3G13790tair10-symbols:ATBFRUCT1tair10-symbols:ATCWINV1TMHMM:TMhelix
UniGene:At.24308UniProt:Q43866
Coordinates (TAIR10) chr3:-:4533084..4535831
Molecular Weight (calculated) 66283.80 Da
IEP (calculated) 9.47
GRAVY (calculated) -0.47
Length 584 amino acids
Sequence (TAIR10)
(BLAST)
001: MTKEVCSNIG LWLLLTLLIG NYVVNLEASH HVYKRLTQST NTKSPSVNQP YRTGFHFQPP KNWMNDPNGP MIYKGIYHLF YQWNPKGAVW GNIVWAHSTS
101: TDLINWDPHP PAIFPSAPFD INGCWSGSAT ILPNGKPVIL YTGIDPKNQQ VQNIAEPKNL SDPYLREWKK SPLNPLMAPD AVNGINASSF RDPTTAWLGQ
201: DKKWRVIIGS KIHRRGLAIT YTSKDFLKWE KSPEPLHYDD GSGMWECPDF FPVTRFGSNG VETSSFGEPN EILKHVLKIS LDDTKHDYYT IGTYDRVKDK
301: FVPDNGFKMD GTAPRYDYGK YYASKTFFDS AKNRRILWGW TNESSSVEDD VEKGWSGIQT IPRKIWLDRS GKQLIQWPVR EVERLRTKQV KNLRNKVLKS
401: GSRLEVYGVT AAQADVEVLF KVRDLEKADV IEPSWTDPQL ICSKMNVSVK SGLGPFGLMV LASKNLEEYT SVYFRIFKAR QNSNKYVVLM CSDQSRSSLK
501: EDNDKTTYGA FVDINPHQPL SLRALIDHSV VESFGGKGRA CITSRVYPKL AIGKSSHLFA FNYGYQSVDV LNLNAWSMNS AQIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)