AT3G12200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.523 ASURE: cytoskeleton What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NIMA-related kinase 7 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes AtNek7, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
NIMA-related kinase 7 (Nek7); FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 5 (TAIR:AT3G20860.1); Has 97728 Blast hits to 96752 proteins in 2792 species: Archae - 79; Bacteria - 10263; Metazoa - 38148; Fungi - 10471; Plants - 20939; Viruses - 426; Other Eukaryotes - 17402 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:3887173..3890550 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63703.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.02 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 571 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQMEANDCQE EHKFTLDNYH VVEQVRRGKS SSDFVVLHDI EDKKYAMKKI CLAKHTDKLK QTALQEMKLL SSLKNPYIVH YEDSWIDNDN NACIFTAYYE 101: GGNMANAIKK ARGKLFPEER IFKWLAQLLL AVNYLHSNRV VHMDLTCSNI FLPKDDHVQL GNYGLAKLIN PEKPVSMVSG ISNSMCPEVL EDQPYGYKSD 201: IWSLGCCMYE ITAHQPAFKA PDMAGLINKI NRSLMSPLPI VYSSTLKQMI KLMLRKKPEY RPTACELLRN PSLQPYLLQC QNLSPIYLPV FPIKPVNSPK 301: DKARRNSLPG KFGKERVSRE KSEVSRSLEN LYPFWTNTET GSSSSSQPAS STNGAEDKLE TKRIDPSCDT LKISEFTSQK SDESLIDPDI AVYSTETPAE 401: ENALPKETEN IFSEESQLRD VDVGVVSAQE VACSPPRAIE EAETQEALPK PKEQITVPIS SVAHSSTEVA AAKDHLSGSL EGDKAKMVKL TASEMSSVLS 501: KLTKLGPPQS KERADALECL LEKCAGLVKQ EKYEELAGLL TPFGEDGVSA RDTAIWFAKT LLSSDKLNQG T |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)