AT3G10630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.841 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); Has 3797 Blast hits to 3780 proteins in 938 species: Archae - 179; Bacteria - 2598; Metazoa - 0; Fungi - 1; Plants - 68; Viruses - 7; Other Eukaryotes - 944 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:3321722..3323185 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55598.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.80 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||
| Length | 487 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDQPPDRSKR PWKFSTIVYS SSILFLLLSI FLLGFTNTDL YKVQSLRFTF TVNRFYSYLQ FLLGFHDGTP KSKSETLNPA SSTPHCVLWM APFLSSGGYS 101: SEAWSYVLSL RNHLTNPRFR ITIEHHGDLE SVEFWNGLAK ETKEVAIEMY REQCRPNETI VVCHSEPGAW YPPLFETLPC PPTGYEDFLS VIGRTMFETD 201: RVNPEHVKRC NQMDHVWVPT DFHVSSFVQS GVDSSKVVKI VQPVDVGFFD PSKYKPLDLM AVGDLVLGSG MKNGFVFLSV FKWEQRKGWD VLLKAYLSEF 301: SGEDNVALFL LTNAYHSDSD FGNKILDFVE EMNIEEPRNG YPFVYVIDKH IAQVDLPRLY KAADAFVLPT RGEGWGRPIV EAMAMSLPVI TTNWSGPTEY 401: LTERNGYPLV VEEMSEVKEG PFEGHQWAEP SVDKLRVLMR RVMSNPDEAK VKGKRGRDDM VKNFAPEVVA KVVADQIARI FDEKIRT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)