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AT1G77130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
ASURE: golgi
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : plant glycogenin-like starch initiation protein 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
plant glycogenin-like starch initiation protein 2 (PGSIP2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: plant glycogenin-like starch initiation protein 1 (TAIR:AT3G18660.3); Has 1471 Blast hits to 1463 proteins in 343 species: Archae - 0; Bacteria - 240; Metazoa - 259; Fungi - 287; Plants - 508; Viruses - 75; Other Eukaryotes - 102 (source: NCBI BLink).
Protein Annotations
BioGrid:29268CAZy:GT8EC:2.4.1.-eggNOG:COG5597
eggNOG:KOG1950EMBL:AC004260EMBL:AY062695EMBL:AY114677
EMBL:CP002684EnsemblPlants:AT1G77130EnsemblPlants:AT1G77130.1entrez:844049
ExpressionAtlas:Q8W4A7Gene3D:3.90.550.10GeneID:844049Genevisible:Q8W4A7
GO:GO:0000139GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0009834GO:GO:0015020GO:GO:0016021GO:GO:0045492
GO:GO:0046872GO:GO:0071555Gramene:AT1G77130.1hmmpanther:PTHR11183
hmmpanther:PTHR11183:SF56HOGENOM:HOG000239796InParanoid:Q8W4A7IntAct:Q8W4A7
InterPro:IPR002495InterPro:IPR029044InterPro:IPR030519KEGG:00051+2.4.1.-
KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-
KEGG:00533+2.4.1.-KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-
KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-KEGG:00603+2.4.1.-
KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-
KEGG:00942+2.4.1.-KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-
KEGG:ath:AT1G77130OMA:RTEFGAWPANTHER:PTHR11183:SF56PaxDb:Q8W4A7
Pfam:PF01501Pfam:Q8W4A7PhylomeDB:Q8W4A7PIR:T00444
PRIDE:Q8W4A7PRO:PR:Q8W4A7ProteinModelPortal:Q8W4A7Proteomes:UP000006548
Reactome:R-ATH-5357572Reactome:R-ATH-70221RefSeq:NP_177838.2SMR:Q8W4A7
STRING:3702.AT1G77130.1SUPFAM:SSF53448TAIR:AT1G77130tair10-symbols:GUX3
tair10-symbols:PGSIP2TMHMM:TMhelixUniGene:At.27260UniProt:Q8W4A7
UniProt:W8Q752
Coordinates (TAIR10) chr1:-:28979066..28981228
Molecular Weight (calculated) 71490.60 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.35
Length 618 amino acids
Sequence (TAIR10)
(BLAST)
001: MIPSSSPMES RHRLSFSNEK TSRRRFQRIE KGVKFNTLKL VLICIMLGAL FTIYRFRYPP LQIPEIPTSF GLTTDPRYVA TAEINWNHMS NLVEKHVFGR
101: SEYQGIGLIN LNDNEIDRFK EVTKSDCDHV ALHLDYAAKN ITWESLYPEW IDEVEEFEVP TCPSLPLIQI PGKPRIDLVI AKLPCDKSGK WSRDVARLHL
201: QLAAARVAAS SKGLHNVHVI LVSDCFPIPN LFTGQELVAR QGNIWLYKPN LHQLRQKLQL PVGSCELSVP LQAKDNFYSA GAKKEAYATI LHSAQFYVCG
301: AIAAAQSIRM SGSTRDLVIL VDETISEYHK SGLVAAGWKI QMFQRIRNPN AVPNAYNEWN YSKFRLWQLT EYSKIIFIDA DMLILRNIDF LFEFPEISAT
401: GNNATLFNSG LMVVEPSNST FQLLMDNINE VVSYNGGDQG YLNEIFTWWH RIPKHMNFLK HFWEGDEPEI KKMKTSLFGA DPPILYVLHY LGYNKPWLCF
501: RDYDCNWNVD IFQEFASDEA HKTWWRVHDA MPENLHKFCL LRSKQKAQLE WDRRQAEKGN YKDGHWKIKI KDKRLKTCFE DFCFWESMLW HWGETNSTNN
601: SSTTTTSSPP HKTALPSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)