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AT3G07020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:24030099 (2013): plasma membrane
  • PMID:22923678 (2012): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15308754 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, carbohydrate metabolic process, metabolic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28 (InterPro:IPR004276), UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G43620.3); Has 2447 Blast hits to 2409 proteins in 631 species: Archae - 0; Bacteria - 1513; Metazoa - 298; Fungi - 386; Plants - 150; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1819eggNOG:KOG1192EMBL:KJ138837EnsemblPlants:AT3G07020
EnsemblPlants:AT3G07020.1entrez:819887ExpressionAtlas:W8PUV4GeneID:819887
GO:GO:0016758GO:GO:0030259Gramene:AT3G07020.1hmmpanther:PTHR11926
hmmpanther:PTHR11926:SF308InterPro:IPR002213InterPro:IPR004276KEGG:00550+2.4.1.227
OMA:GSNIPHGPANTHER:PTHR11926PaxDb:W8PUV4Pfam:PF00201
Pfam:PF03033PhylomeDB:W8PUV4ProteinModelPortal:W8PUV4RefSeq:NP_850529.1
SMR:W8PUV4STRING:3702.AT3G07020.1SUPFAM:SSF53756UniGene:At.417
unipathway:UPA00219UniProt:W8PUV4
Coordinates (TAIR10) chr3:-:2217841..2221590
Molecular Weight (calculated) 69324.90 Da
IEP (calculated) 6.72
GRAVY (calculated) -0.24
Length 637 amino acids
Sequence (TAIR10)
(BLAST)
001: MPEISPAELA KVSSSSSSSS SSSSGRASVK IEEIEGGAAA SGVVIVSEEL ETNPKTVVAS IADETVAESS GTGNKSFSRV WTMPLEGSSS SDKAESSSTN
101: QPRLDKSKTE RQQKVTHILA EDAAKIFDDK ISAGKKLKLL NRIATVKHDG TVEFEVPADA IPQPIVVDRG ESKNGVCADE SIDGVDLQYI PPMQIVMLIV
201: GTRGDVQPFV AIAKRLQDYG HRVRLATHAN FKEFVLTAGL EFYPLGGDPK VLAGYMVKNK GFLPSGPSEI PIQRNQMKDI IYSLLPACKE PDPDSGISFK
301: ADAIIANPPA YGHTHVAEAL KIPIHVFFTM PWTPTSEFPH PLSRVKQPAG YRLSYQIVDS LIWLGIRDMV NDLRKKKLKL RPVTYLSGTQ GSGSNIPHGY
401: MWSPHLVPKP KDWGPQIDVV GFCYLDLASN YEPPAELVEW LEAGDKPIYI GFGSLPVQEP EKMTEIIVEA LQRTKQRGII NKGWGGLGNL KEPKDFVYLL
501: DNVPHDWLFP RCKAVVHHGG AGTTAAGLKA SCPTTIVPFF GDQPFWGERV HARGVGPSPI PVDEFSLHKL EDAINFMLDD KVKSSAETLA KAMKDEDGVA
601: GAVKAFFKHL PSAKQNISDP IPEPSGFLSF RKCFGFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)