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AT3G06500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.523
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant neutral invertase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: Plant neutral invertase family protein (TAIR:AT1G56560.1); Has 684 Blast hits to 681 proteins in 97 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 315; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink).
Protein Annotations
EC:3.2.1.26eggNOG:ENOG410IJBSeggNOG:ENOG410XPYNEMBL:AC020580
EMBL:AK226304EMBL:AK316698EMBL:BT008650EMBL:CP002686
EnsemblPlants:AT3G06500EnsemblPlants:AT3G06500.1entrez:819828GeneID:819828
Genevisible:B9DFA8GO:GO:0004575GO:GO:0005739GO:GO:0005975
GO:GO:0007623GO:GO:0010029GO:GO:0033926GO:GO:0048510
Gramene:AT3G06500.1gramene_pathway:3.2.1.26gramene_pathway:PWY-621hmmpanther:PTHR31916
hmmpanther:PTHR31916:SF9HOGENOM:HOG000232531InParanoid:B9DFA8InterPro:IPR008928
InterPro:IPR024746iPTMnet:B9DFA8KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26
KEGG:ath:AT3G06500OMA:SCICVSAPaxDb:B9DFA8Pfam:B9DFA8
Pfam:PF12899PRIDE:B9DFA8PRO:PR:B9DFA8ProteinModelPortal:B9DFA8
Proteomes:UP000006548RefSeq:NP_187302.2STRING:3702.AT3G06500.1SUPFAM:SSF48208
TAIR:AT3G06500UniGene:At.40513UniProt:B9DFA8
Coordinates (TAIR10) chr3:+:2012309..2015471
Molecular Weight (calculated) 74726.40 Da
IEP (calculated) 8.06
GRAVY (calculated) -0.28
Length 664 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSRSCICVS AMKPCCRFLI SFRSSSLFGF SPPNSGKFIN SSKLHCTKID SRSIRSGIHC RRIVLDRNAF CDSDSISWGG GGSRVLRARG SSRGRGRGVL
101: VIPHVASDFR NYSTSSLDSH VNDKSFESMF VKPLVFKEVE KTEGIPKRER GNVGGGKDAN FGNVGVRKET ERCLSQTEVE KEAWKLLRGA VVNYCGFPVG
201: TVAANDPGDT QTLNYDQVFI RDFVPSAYAF MLDGEGEIVR NFLLHTLQLQ SWEKTVDCHS PGPGLMPASF KVKSAPLEGN DGSFEEFLDP DFGGSAIGRV
301: SPVDSGLWWI ILLRAYGKLT GDYTLQERID VQTGIKLILK LCLADGFDMF PTLLVTDGSC MVDRRMGIHG HPLEIQALFY SALRCAREML IVNDGTKSLV
401: TAVNNRLSAL SFHIREYYWV DIKKINEIYR YNTEEYSADA TNKFNIYPEQ IPTWLVDWIP DKGGYFIGNL QPAHMDFRFF TLGNLWAVIS SLGNQEQNEG
501: VMTLIEEKWD DLVANMPLKI CFPALEKDEW RIITGSDPKN TPWSYHNGGS WPTLLWQFTL ACIKMGKLEL AKKAVAVAEK RLKEDEWPEY YDTKSGRFVG
601: KQSRLYQTWT IAGFLAAKKL IEQPEKASLL FWEEDYQLLE TCVCGLSKSS GRKNKCSRFT PPRS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)