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AT1G73480.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.658
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18360.1); Has 6390 Blast hits to 6380 proteins in 1730 species: Archae - 36; Bacteria - 4672; Metazoa - 140; Fungi - 153; Plants - 452; Viruses - 63; Other Eukaryotes - 874 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G73480-MONOMEReggNOG:COG2267eggNOG:KOG1455EMBL:AY045929
EMBL:BT001959EMBL:CP002684EnsemblPlants:AT1G73480EnsemblPlants:AT1G73480.1
entrez:843683ESTHER:arath-T9L24.33Gene3D:3.40.50.1820GeneID:843683
GO:GO:0016021GO:GO:0016787Gramene:AT1G73480.1gramene_pathway:4.3.1.18
gramene_pathway:PWY-6196hmmpanther:PTHR11614hmmpanther:PTHR11614:SF87HOGENOM:HOG000003227
InterPro:IPR022742InterPro:IPR029058KEGG:ath:AT1G73480KO:K01054
MEROPS:S33.A12OMA:ALFTQSWPfam:PF12146PhylomeDB:Q94AM5
Proteomes:UP000006548Reactome:R-ATH-1482883Reactome:R-ATH-426048RefSeq:NP_565066.1
SMR:Q94AM5STRING:3702.AT1G73480.1SUPFAM:SSF53474TAIR:AT1G73480
TMHMM:TMhelixUniGene:At.23620UniProt:Q94AM5
Coordinates (TAIR10) chr1:+:27629266..27632486
Molecular Weight (calculated) 50769.60 Da
IEP (calculated) 10.29
GRAVY (calculated) -0.05
Length 463 amino acids
Sequence (TAIR10)
(BLAST)
001: MICSSKGTIL IARGKNSNTI PRLPLKGSST NYANRIQIRN PISVKTFRRS SSSSMAVETM SMGSDSSTLI LTSGASGRVR VLFSMRELKR LVTIIQSLIL
101: FLLLPFRVVV WRRRTGAVVI RDDKQERKVW SPPQIVVRKR NIGGESSVSP PSVPAAVVDG EVAVRRELAI KRVLEDEGGD GSSVRDYSLF TTKRGDTLFS
201: QSWSPLSPNH RGLIVLLHGL NEHSGRYSDF AKQLNANGFK VYGIDWIGHG GSDGLHAYVP SLDYAVTDLK SFLEKVFTEN PGLPCFCFGH STGGAIILKA
301: MLDPKIESRV SGIALTSPAV GVQPSHPIFA VLAPIMAFLL PRYQISAANK KGMPVSRDPA ALIAKYSDPL VFTGSIRVKT GYEILRITAH LQQNLNKVKV
401: PFLVMHGTDD TVTDPSASKK LYEEAASSDK SLKLYDGLLH DLLFEPEREI IAGAILDWLN QRV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)