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AT3G04310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.972
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J10NeggNOG:ENOG410YNA5EMBL:AC016829EMBL:CP002686
EnsemblPlants:AT3G04310EnsemblPlants:AT3G04310.1entrez:819586GeneID:819586
GO:GO:0016021Gramene:AT3G04310.1hmmpanther:PTHR35719hmmpanther:PTHR35719:SF1
HOGENOM:HOG000091165KEGG:ath:AT3G04310OMA:MLAPIGIPhylomeDB:Q9M8Y7
Proteomes:UP000006548RefSeq:NP_187081.1TAIR:AT3G04310TMHMM:TMhelix
UniGene:At.40858UniProt:Q9M8Y7
Coordinates (TAIR10) chr3:-:1141581..1142528
Molecular Weight (calculated) 30808.50 Da
IEP (calculated) 7.80
GRAVY (calculated) -0.53
Length 269 amino acids
Sequence (TAIR10)
(BLAST)
001: MANLLYLQLS SCVVRGRFCS LNCDFDLCPN IVSRGSFDCR ASRGPSWEEE LFRDEGFASF EFGNRKKKRP WWLDDDDDDD DNDDWMNEEE EDWSMVFEVF
101: RTLSWMLAPI GISLLLGTDS NAGVMALAVP LVQSVLSLVV SKVWSRPSIR SMKRSRRDTF SRSASVSSGR TRKARQGGNM RGGVDKGGYK SWIVGDDDSN
201: SMGTGYGGWD DLDTLREIRN DNPLNENVRP KQQFERKATR RWRVKEKPLL LRMLIAAFPF LGSWTKLLF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)