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AT3G04060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAC domain containing protein 46
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 46 (NAC046); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: Arabidopsis NAC domain containing protein 87 (TAIR:AT5G18270.1); Has 3018 Blast hits to 3013 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3018; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:819561eggNOG:ENOG410IJPHeggNOG:ENOG410YDQ3EMBL:AC011698
EMBL:AF361623EMBL:AY081834EMBL:AY084852EMBL:CP002686
EnsemblPlants:AT3G04060EnsemblPlants:AT3G04060.1entrez:819561GeneID:819561
GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351
Gramene:AT3G04060.1hmmpanther:PTHR31744hmmpanther:PTHR31744:SF10HOGENOM:HOG000237406
IntAct:Q9SQQ6InterPro:IPR003441KEGG:ath:AT3G04060OMA:FRGKGCL
Pfam:PF02365Pfscan:PS51005PhylomeDB:Q9SQQ6PROSITE:PS51005
Proteomes:UP000006548RefSeq:NP_187056.1SMR:Q9SQQ6STRING:3702.AT3G04060.1
SUPFAM:SSF101941TAIR:AT3G04060tair10-symbols:anac046tair10-symbols:NAC046
UniGene:At.27906UniProt:Q9SQQ6
Coordinates (TAIR10) chr3:-:1053625..1054952
Molecular Weight (calculated) 37782.70 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.54
Length 338 amino acids
Sequence (TAIR10)
(BLAST)
001: MVEEGGVVVN QGGDQEVVDL PPGFRFHPTD EEIITHYLKE KVFNIRFTAA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)