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AT3G03050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.500
plasma membrane 0.500
ASURE: golgi,plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cellulose synthase-like D3
Curator
Summary (TAIR10)
encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.
Computational
Description (TAIR10)
cellulose synthase-like D3 (CSLD3); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3102 Blast hits to 2806 proteins in 639 species: Archae - 29; Bacteria - 1146; Metazoa - 1; Fungi - 6; Plants - 1829; Viruses - 5; Other Eukaryotes - 86 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1215eggNOG:ENOG410IEH4EMBL:KJ138844EnsemblPlants:AT3G03050
EnsemblPlants:AT3G03050.1entrez:821148ExpressionAtlas:W8Q6V3Gene3D:3.30.40.10
GeneID:821148GO:GO:0016021GO:GO:0016760GO:GO:0030244
Gramene:AT3G03050.1gramene_pathway:2.4.1.12gramene_pathway:PWY-1001hmmpanther:PTHR13301
hmmpanther:PTHR13301:SF72InterPro:IPR005150InterPro:IPR013083KEGG:ath:AT3G03050
OMA:QPSAEHTPaxDb:W8Q6V3Pfam:PF03552Pfam:PF14570
Pfam:Q9M9M4PhylomeDB:W8Q6V3ProteinModelPortal:W8Q6V3Proteomes:UP000006548
RefSeq:NP_186955.1SMR:W8Q6V3STRING:3702.AT3G03050.1SUPFAM:SSF57850
tair10-symbols:ATCSLD3tair10-symbols:CSLD3tair10-symbols:KJKTMHMM:TMhelix
UniGene:At.25109UniProt:Q9M9M4UniProt:W8Q6V3
Coordinates (TAIR10) chr3:+:687873..691629
Molecular Weight (calculated) 128596.00 Da
IEP (calculated) 7.80
GRAVY (calculated) -0.21
Length 1145 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASNNHFMNS RSNLSTNSDA AEAERHQQPV SNSVTFARRT PSGRYVNYSR DDLDSELGSV DLTGYSVHIP PTPDNQPMDP SISQKVEEQY VSNSLFTGGF
0101: NSVTRAHLME KVIDTETSHP QMAGAKGSSC AVPGCDVKVM SDERGQDLLP CECDFKICRD CFMDAVKTGG MCPGCKEPYR NTDLADFADN NKQQRPMLPP
0201: PAGGSKMDRR LSLMKSTKSG LMRSQTGDFD HNRWLFETSG TYGFGNAFWT KDGNFGSDKD GNGHGMGPQD LMSRPWRPLT RKLQIPAAVI SPYRLLILIR
0301: IVVLALFLMW RIKHKNPDAI WLWGMSVVCE LWFALSWLLD QLPKLCPINR ATDLNVLKEK FETPTPSNPT GKSDLPGLDM FVSTADPEKE PPLVTSNTIL
0401: SILAADYPVE KLACYVSDDG GALLTFEAMA EAASFANMWV PFCRKHNIEP RNPDSYFSLK RDPYKNKVKA DFVKDRRRVK REYDEFKVRI NSLPDSIRRR
0501: SDAYHAREEI KAMKLQRQNR DEEIVEPVKI PKATWMADGT HWPGTWINSG PDHSRSDHAG IIQVMLKPPS DEPLHGVSEG FLDLTDVDIR LPLLVYVSRE
0601: KRPGYDHNKK AGAMNALVRA SAIMSNGPFI LNLDCDHYIY NSQALREGMC FMMDRGGDRL CYVQFPQRFE GIDPSDRYAN HNTVFFDVNM RALDGLMGPV
0701: YVGTGCLFRR IALYGFDPPR AKEHHPGFCS CCFSRKKKKS RVPEENRSLR MGGDSDDDEE MNLSLVPKKF GNSTFLIDSI PVAEFQGRPL ADHPAVQNGR
0801: PPGALTIPRE LLDASTVAEA IAVISCWYED KTEWGSRIGW IYGSVTEDVV TGYRMHNRGW KSVYCVTKRD AFRGTAPINL TDRLHQVLRW ATGSVEIFFS
0901: RNNAFFASPR MKILQRIAYL NVGIYPFTSF FLIVYCFLPA LSLFSGQFIV QTLNVTFLVY LLIISITLCL LALLEIKWSG ISLEEWWRNE QFWLIGGTSA
1001: HLAAVIQGLL KVVAGIEISF TLTSKSGGED VDDEFADLYI VKWTSLMIPP ITIMMVNLIA IAVGFSRTIY SVIPQWSKLI GGVFFSFWVL AHLYPFAKGL
1101: MGRRGRTPTI VYVWSGLVAI TISLLWVAIN PPAGSTQIGG SFTFP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)