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AT3G01090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.798
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : SNF1 kinase homolog 10
Curator
Summary (TAIR10)
encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase
Computational
Description (TAIR10)
SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 133405 Blast hits to 131080 proteins in 4728 species: Archae - 166; Bacteria - 15101; Metazoa - 49470; Fungi - 13387; Plants - 32551; Viruses - 541; Other Eukaryotes - 22189 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG0583EMBL:AK316711EnsemblPlants:AT3G01090
EnsemblPlants:AT3G01090.1entrez:821259ExpressionAtlas:B9DFC1GO:GO:0004672
GO:GO:0005524hmmpanther:PTHR24343hmmpanther:PTHR24343:SF156HOGENOM:HOG000233016
IntAct:B9DFC1InterPro:IPR000719InterPro:IPR001772InterPro:IPR008271
InterPro:IPR009060InterPro:IPR011009InterPro:IPR015940InterPro:IPR017441
InterPro:IPR028375iPTMnet:B9DFC1KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1
MINT:MINT-8312716PaxDb:B9DFC1Pfam:PF00069Pfam:PF00627
Pfam:PF02149Pfscan:PS50011Pfscan:PS50030Pfscan:PS50032
PRIDE:B9DFC1PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50030PROSITE:PS50032ProteinModelPortal:B9DFC1scanprosite:PS00107
scanprosite:PS00108SMART:SM00165SMART:SM00220STRING:3702.AT3G01090.2
SUPFAM:SSF103243SUPFAM:SSF46934SUPFAM:SSF56112tair10-symbols:AKIN10
tair10-symbols:KIN10tair10-symbols:SNRK1.1UniProt:B9DFC1
Coordinates (TAIR10) chr3:-:31437..33977
Molecular Weight (calculated) 58376.80 Da
IEP (calculated) 8.03
GRAVY (calculated) -0.29
Length 512 amino acids
Sequence (TAIR10)
(BLAST)
001: MDGSGTGSRS GVESILPNYK LGRTLGIGSF GRVKIAEHAL TGHKVAIKIL NRRKIKNMEM EEKVRREIKI LRLFMHPHII RLYEVIETPT DIYLVMEYVN
101: SGELFDYIVE KGRLQEDEAR NFFQQIISGV EYCHRNMVVH RDLKPENLLL DSKCNVKIAD FGLSNIMRDG HFLKTSCGSP NYAAPEVISG KLYAGPEVDV
201: WSCGVILYAL LCGTLPFDDE NIPNLFKKIK GGIYTLPSHL SPGARDLIPR MLVVDPMKRV TIPEIRQHPW FQAHLPRYLA VPPPDTVQQA KKIDEEILQE
301: VINMGFDRNH LIESLRNRTQ NDGTVTYYLI LDNRFRASSG YLGAEFQETM EGTPRMHPAE SVASPVSHRL PGLMEYQGVG LRSQYPVERK WALGLQSRAH
401: PREIMTEVLK ALQDLNVCWK KIGHYNMKCR WVPNSSADGM LSNSMHDNNY FGDESSIIEN EAAVKSPNVV KFEIQLYKTR DDKYLLDLQR VQGPQFLFLD
501: LCAAFLAQLR VL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)