suba logo
AT2G47060.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G62220.1); Has 112106 Blast hits to 110861 proteins in 4523 species: Archae - 111; Bacteria - 13175; Metazoa - 41722; Fungi - 8890; Plants - 31792; Viruses - 347; Other Eukaryotes - 16069 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G47060-MONOMERBioCyc:ARA:GQT-1397-MONOMERBioCyc:ARA:GQT-1398-MONOMERBioCyc:ARA:GQT-1399-MONOMER
BioCyc:ARA:GQT-1400-MONOMERBioGrid:4655EC:2.7.11.1EMBL:AC004411
EMBL:AF325090EMBL:AY080876EMBL:AY114044EMBL:CP002685
EnsemblPlants:AT2G47060EnsemblPlants:AT2G47060.1EnsemblPlants:AT2G47060.2entrez:819320
ExpressionAtlas:O80719GeneID:819320Genevisible:O80719GO:GO:0004674
GO:GO:0005524GO:GO:0006979hmmpanther:PTHR27001hmmpanther:PTHR27001:SF56
HOGENOM:HOG000116550InParanoid:O80719IntAct:O80719InterPro:IPR000719
InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441
KEGG:ath:AT2G47060MINT:MINT-8085776OMA:YQRVKIAPfam:O80719
Pfam:PF07714Pfscan:PS50011PhylomeDB:O80719PIR:T02181
PRIDE:O80719PRO:PR:O80719PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:O80719Proteomes:UP000006548Reactome:R-ATH-450302
Reactome:R-ATH-450321RefSeq:NP_001031552.1RefSeq:NP_001031553.1RefSeq:NP_182229.1
RefSeq:NP_850467.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:O80719SUPFAM:SSF56112SwissPalm:O80719TAIR:AT2G47060
UniGene:At.21876UniProt:O80719
Coordinates (TAIR10) chr2:-:19333116..19334759
Molecular Weight (calculated) 39933.50 Da
IEP (calculated) 7.43
GRAVY (calculated) -0.34
Length 365 amino acids
Sequence (TAIR10)
(BLAST)
001: MSCFGCCGED DDMHKTADYG GRHNQAKHFP PGNDARHHQA SETAQKGPPV VKLQPIEVPI IPFSELKEAT DDFGSNSLIG EGSYGRVYYG VLNNDLPSAI
101: KKLDSNKQPD NEFLAQVSMV SRLKHDNFVQ LLGYCVDGNS RILSYEFANN GSLHDILHGR KGVKGAQPGP VLSWYQRVKI AVGAARGLEY LHEKANPHII
201: HRDIKSSNVL LFEDDVAKIA DFDLSNQAPD MAARLHSTRV LGTFGYHAPE YAMTGQLNAK SDVYSFGVVL LELLTGRKPV DHRLPRGQQS LVTWATPKLS
301: EDKVKQCVDA RLGGDYPPKA VAKLAAVAAL CVQYEADFRP NMSIVVKALQ PLLNARAVAP GEGVH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)