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AT4G13000.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT3G25250.1); Has 90354 Blast hits to 89318 proteins in 3214 species: Archae - 80; Bacteria - 12840; Metazoa - 34852; Fungi - 11582; Plants - 13206; Viruses - 261; Other Eukaryotes - 17533 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G13000-MONOMEReggNOG:ENOG410XQ0CeggNOG:KOG0610EMBL:AK117852
EMBL:AL079349EMBL:AL161535EMBL:BT005330EMBL:CP002687
EnsemblPlants:AT4G13000EnsemblPlants:AT4G13000.1entrez:826913GeneID:826913
GO:GO:0004674GO:GO:0005524GO:GO:0016301GO:GO:0046777
Gramene:AT4G13000.1hmmpanther:PTHR24351hmmpanther:PTHR24351:SF69HOGENOM:HOG000233027
IntAct:Q9SV69InterPro:IPR000719InterPro:IPR000961InterPro:IPR008271
InterPro:IPR011009KEGG:ath:AT4G13000MINT:MINT-8085814OMA:GERRMDP
Pfam:PF00069Pfscan:PS50011Pfscan:PS51285PhylomeDB:Q9SV69
PIR:T10202PROSITE:PS00108PROSITE:PS50011PROSITE:PS51285
Proteomes:UP000006548RefSeq:NP_193036.1scanprosite:PS00108SMART:SM00220
SMR:Q9SV69STRING:3702.AT4G13000.1SUPFAM:SSF56112TAIR:AT4G13000
UniGene:At.33427UniProt:Q9SV69
Coordinates (TAIR10) chr4:-:7598099..7599217
Molecular Weight (calculated) 42161.30 Da
IEP (calculated) 6.36
GRAVY (calculated) -0.31
Length 372 amino acids
Sequence (TAIR10)
(BLAST)
001: MSNHLLPPEN KIPTLNFDHL EIFSALGRGS KGVVFLVKAD NKWLALKVIL RESIESKKAK DEYKRISFEQ GVLSRFDHPL FPRLHGVIST DKVIGYAIDY
101: CPGRDLNSLR KKQSEEMFSD EIIRFYAAEL VIALEYLHNQ GIVYRDLKPD NVMIQENGHL MLVDFDLSTN LPPRTPQSSF SSSPRLSTAT KKERSIFAFS
201: GLCNSGISPD DSVSRSSESE FSGEKSNSFV GTEEYVAPEV ITGSGHDFAV DWWSLGVVLY EMLYGATPFR GSNRKETFLK ILTEPPSLVG ETTSLRDLVR
301: KLLEKDPSRR INVEGIKGHD FFKGLDWDLV LKVSRPPYIP APENYEISKI DVEKFVHEIF TKCEHNGNFI VF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)