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AT2G45880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : beta-amylase 7
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G45880-MONOMERCAZy:GH14EC:3.2.1.2eggNOG:ENOG410IECX
eggNOG:ENOG410XNXSEMBL:AC004665EMBL:AK227323EMBL:CP002685
EnsemblPlants:AT2G45880EnsemblPlants:AT2G45880.1entrez:819196Gene3D:3.20.20.80
GeneID:819196Genevisible:O80831GO:GO:0000272GO:GO:0003700
GO:GO:0005634GO:GO:0005737GO:GO:0006355GO:GO:0016161
GO:GO:0048831Gramene:AT2G45880.1gramene_pathway:3.2.1.2gramene_pathway:PWY-842
hmmpanther:PTHR31352hmmpanther:PTHR31352:SF2HOGENOM:HOG000238755InParanoid:O80831
InterPro:IPR001554InterPro:IPR008540InterPro:IPR013781InterPro:IPR017853
InterPro:IPR018238iPTMnet:O80831KEGG:00500+3.2.1.2KEGG:ath:AT2G45880
OMA:LMSFHECPaxDb:O80831Pfam:O80831Pfam:PF01373
Pfam:PF05687PhylomeDB:O80831PIR:T02459PRIDE:O80831
PRINTS:PR00750PRO:PR:O80831PROSITE:PS00506ProteinModelPortal:O80831
Proteomes:UP000006548RefSeq:NP_182112.2scanprosite:PS00506SMR:O80831
STRING:3702.AT2G45880.1SUPFAM:SSF51445TAIR:AT2G45880tair10-symbols:BAM7
tair10-symbols:BMY4UniGene:At.36579UniProt:O80831
Coordinates (TAIR10) chr2:-:18878674..18881824
Molecular Weight (calculated) 77135.20 Da
IEP (calculated) 6.63
GRAVY (calculated) -0.45
Length 691 amino acids
Sequence (TAIR10)
(BLAST)
001: MATDMHKLLG TSEEDDDEEM DMDVKEEDDG DRRNRDKHAA SGSSSNDEFM FQQSMQDQVG TPGGGGSRRS RPLEEKERTK LRERHRRAIT ARILGGLRRH
101: GNYNLRVRAD INDVIAALAR EAGWVVLPDG TTFPSKSQGT KPTGGSSAVA AGSSASHIAS QQTSPPALRV VSSGLRSPVE LSSCRMKGVF TPAPSPYDML
201: PIQSPELVGS VNKAEGLVGC SVDVINSKQI LEIPPNLTEQ DFSGTPYVPV YVMLPLGVIN MKCELADRDG LLKHLRILKS IHVDGVKVDC WWGIVEGHSP
301: QEYNWTGYRQ LFQMVRDLNL KIQVLMSFHE CGGNVGDDVC IPLPHWVAEI GRTNPDIYFT DREGRRNPEC LSWGIDKERI LRGRTALEVY FDYMRSFRIE
401: LAEFLEDGVI SMVEIGLGPC GELRYPSCPI KHGWRYPGVG EFQCYDKYLS KSLRKAAESR GHLFWARGPD NTGSYNSQPQ GTGFFCDGGD YDGLYGRFFL
501: KWYSQVLIDH ADQILCLAKL VFDSSCIAAK LPDVHWWYRT ASHAAELTAG FYNPSNRDGY SAIASTLKKH GATLSFVSGE VQVLNRPDDF SGALGEPEAV
601: AWQVLNAAWD SGTPVARENS LACHDRVGYN KMLESVKFRN DPDRKHLSSF AYSRLVPALM EGHNIVEFER FVKKLHGEAV MNHHHHHHQQ V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)