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AT2G36460.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:24124904 (2013): plastid
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:22215637 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21311031 (2011): mitochondrion
  • PMID:21311031 (2011): plastid
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid
  • PMID:19334764 (2009): plasma membrane
  • PMID:18998720 (2009): extracellular region
  • PMID:17644812 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Aldolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 5036 Blast hits to 5030 proteins in 977 species: Archae - 0; Bacteria - 714; Metazoa - 1434; Fungi - 8; Plants - 477; Viruses - 0; Other Eukaryotes - 2403 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G36460-MONOMERBioCyc:ARA:GQT-2817-MONOMEREC:4.1.2.13eggNOG:COG3588
eggNOG:KOG1557EMBL:AC006919EMBL:AK226842EMBL:AY034897
EMBL:AY063044EMBL:AY085114EMBL:CP002685EnsemblPlants:AT2G36460
EnsemblPlants:AT2G36460.1entrez:818220ExpressionAtlas:Q9SJQ9Gene3D:3.20.20.70
GeneID:818220GO:GO:0004332GO:GO:0005507GO:GO:0005739
GO:GO:0005829GO:GO:0005886GO:GO:0006096GO:GO:0009506
GO:GO:0009651GO:GO:0009735GO:GO:0016020GO:GO:0046686
Gramene:AT2G36460.1gramene_pathway:4.1.2.13gramene_pathway:CALVIN-PWYgramene_pathway:GLYCOLYSIS
gramene_pathway:PWY-1042gramene_pathway:PWYQT-4428hmmpanther:PTHR11627HOGENOM:HOG000220876
IntAct:Q9SJQ9InterPro:IPR000741InterPro:IPR013785InterPro:IPR029768
KEGG:00010+4.1.2.13KEGG:00030+4.1.2.13KEGG:00051+4.1.2.13KEGG:00680+4.1.2.13
KEGG:00710+4.1.2.13MINT:MINT-8065479OMA:CIHENANPfam:PF00274
PhylomeDB:Q9SJQ9PIR:A84781PROSITE:PS00158Proteomes:UP000006548
Reactome:R-ATH-114608Reactome:R-ATH-70171Reactome:R-ATH-70263Reactome:R-ATH-70350
RefSeq:NP_181187.1scanprosite:PS00158SMR:Q9SJQ9STRING:3702.AT2G36460.1
SUPFAM:SSF51569SwissPalm:Q9SJQ9TAIR:AT2G36460UniGene:At.23119
UniPathway:UPA00109UniProt:Q9SJQ9
Coordinates (TAIR10) chr2:-:15296929..15298387
Molecular Weight (calculated) 38388.90 Da
IEP (calculated) 7.46
GRAVY (calculated) -0.17
Length 358 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TTPGALPCLS GVILFEETLY QKSSDGTPFV DMLKSAGVLP
101: GIKVDKGTVE LAGTNGETTT QGLDGLGDRC KKYYEAGARF AKWRAVLKIG VNEPSQLAIH ENAYGLARYA VICQENGLVP IVEPEILVDG SHDIQKCAAV
201: TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSESAKVAP EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL
301: QQSTLKTWGG KEENVKKAQE AFLVRCKANS EATLGAYKGD AKLGEGAAES LHVKDYKY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)