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AT5G58070.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
endoplasmic reticulum 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:31932409 (2020): plastid
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30875866 (2019): plasma membrane
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25641898 (2015): plasma membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:22550958 (2012): plastid
  • PMID:22430844 (2012): Golgi
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21311031 (2011): mitochondrion
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): endoplasmic reticulum
  • PMID:15574830 (2004): plasma membrane
  • PMID:15276431 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : temperature-induced lipocalin
Curator
Summary (TAIR10)
Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.
Computational
Description (TAIR10)
temperature-induced lipocalin (TIL); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to cold, response to light stimulus, response to heat; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin, bacterial (InterPro:IPR002446), Lipocalin, ApoD type (InterPro:IPR022271), Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 2007 Blast hits to 1991 proteins in 692 species: Archae - 0; Bacteria - 1480; Metazoa - 169; Fungi - 10; Plants - 132; Viruses - 6; Other Eukaryotes - 210 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1847-MONOMEReggNOG:COG3040eggNOG:KOG4824EMBL:AB024029
EMBL:AY062789EMBL:AY081612EMBL:AY085685EMBL:CP002688
EnsemblPlants:AT5G58070EnsemblPlants:AT5G58070.1entrez:835919Gene3D:2.40.128.20
GeneID:835919Genevisible:Q9FGT8GO:GO:0005215GO:GO:0005737
GO:GO:0005739GO:GO:0005773GO:GO:0005774GO:GO:0005783
GO:GO:0005794GO:GO:0005886GO:GO:0006629GO:GO:0006883
GO:GO:0009408GO:GO:0009409GO:GO:0009414GO:GO:0009416
GO:GO:0009506GO:GO:0009644GO:GO:0009735GO:GO:0009898
GO:GO:0009941GO:GO:0010286GO:GO:0010431GO:GO:0030644
GO:GO:0031969GO:GO:0042538GO:GO:0045735GO:GO:0050826
GO:GO:1901002GO:GO:1901562GO:GO:1902884Gramene:AT5G58070.1
hmmpanther:PTHR10612hmmpanther:PTHR10612:SF19HOGENOM:HOG000061523InterPro:IPR000566
InterPro:IPR002446InterPro:IPR011038InterPro:IPR012674InterPro:IPR022271
InterPro:IPR022272KEGG:ath:AT5G58070KO:K03098OMA:MEEETYK
PaxDb:Q9FGT8Pfam:PF08212PhylomeDB:Q9FGT8PIRSF:PIRSF036893
PRINTS:PR01171ProMEX:Q9FGT8PROSITE:PS00213ProteinModelPortal:Q9FGT8
Proteomes:UP000006548RefSeq:NP_200615.1scanprosite:PS00213SMR:Q9FGT8
STRING:3702.AT5G58070.1SUPFAM:SSF50814TAIR:AT5G58070tair10-symbols:ATTIL
tair10-symbols:TILUniGene:At.21115UniGene:At.24479UniProt:Q9FGT8
Coordinates (TAIR10) chr5:-:23500512..23501156
Molecular Weight (calculated) 21435.30 Da
IEP (calculated) 6.29
GRAVY (calculated) -0.68
Length 186 amino acids
Sequence (TAIR10)
(BLAST)
001: MTEKKEMEVV KGLNVERYMG RWYEIASFPS RFQPKNGVDT RATYTLNPDG TIHVLNETWS NGKRGFIEGS AYKADPKSDE AKLKVKFYVP PFLPIIPVTG
101: DYWVLYIDPD YQHALIGQPS RSYLWILSRT AQMEEETYKQ LVEKAVEEGY DISKLHKTPQ SDTPPESNTA PEDSKGVWWF KSLFGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)