AT2G47180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.599 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : galactinol synthase 1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
galactinol synthase 1 (GolS1); FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: response to high light intensity, carbohydrate biosynthetic process, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 2 (TAIR:AT1G56600.1); Has 1198 Blast hits to 1197 proteins in 285 species: Archae - 0; Bacteria - 104; Metazoa - 258; Fungi - 278; Plants - 420; Viruses - 71; Other Eukaryotes - 67 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:19369049..19370372 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39597.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.48 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||
| Length | 344 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAPGLTQTAD AMSTVTITKP SLPSVQDSDR AYVTFLAGNG DYVKGVVGLA KGLRKVKSAY PLVVAMLPDV PEEHRRILVD QGCIVREIEP VYPPENQTQF 101: AMAYYVINYS KLRIWKFVEY SKMIYLDGDI QVYENIDHLF DLPDGYLYAV MDCFCEKTWS HTPQYKIRYC QQCPDKVQWP KAELGEPPAL YFNAGMFLYE 201: PNLETYEDLL RTLKITPPTP FAEQDFLNMY FKKIYKPIPL VYNLVLAMLW RHPENVELGK VKVVHYCAAG SKPWRYTGKE ANMEREDIKM LVKKWWDIYD 301: DESLDYKKPV TVVDTEVDLV NLKPFITALT EAGRLNYVTA PSAA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)