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AT2G35800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : mitochondrial substrate carrier family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G26360.1); Has 17569 Blast hits to 12630 proteins in 423 species: Archae - 0; Bacteria - 12; Metazoa - 7266; Fungi - 5152; Plants - 3396; Viruses - 0; Other Eukaryotes - 1743 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4110BIIeggNOG:KOG0768EMBL:AY063948EMBL:AY096712
EMBL:CP002685EnsemblPlants:AT2G35800EnsemblPlants:AT2G35800.1entrez:818153
Gene3D:1.10.238.10Gene3D:1.50.40.10GeneID:818153GO:GO:0003735
GO:GO:0005509GO:GO:0006412GO:GO:0009507GO:GO:0009536
GO:GO:0009941GO:GO:0016021GO:GO:0055085Gramene:AT2G35800.1
hmmpanther:PTHR24089hmmpanther:PTHR24089:SF300HOGENOM:HOG000030103InterPro:IPR002048
InterPro:IPR002067InterPro:IPR011992InterPro:IPR018108InterPro:IPR018247
InterPro:IPR023395KEGG:ath:AT2G35800OMA:NDPVESFPfam:PF00153
Pfscan:PS50222Pfscan:PS50920PhylomeDB:Q8VZP7PRINTS:PR00926
PROSITE:PS00018PROSITE:PS50222PROSITE:PS50920Proteomes:UP000006548
RefSeq:NP_850252.1scanprosite:PS00018SMR:Q8VZP7STRING:3702.AT2G35800.1
SUPFAM:0048588SUPFAM:SSF103506SUPFAM:SSF47473TAIR:AT2G35800
UniGene:At.27402UniProt:Q8VZP7
Coordinates (TAIR10) chr2:+:15044437..15048352
Molecular Weight (calculated) 90631.90 Da
IEP (calculated) 9.08
GRAVY (calculated) -0.13
Length 823 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSKNDHIET LFNSIQLVKD VVLLPIELGV KKAARDIENC WISKERDLGL VFRSSGRNRK KRIVATPEFD DNATNNVQCV VVTDERKKGL SIKKIPVKSL
101: FGMFSPNLVS EKLSRGNDVV VAKKDKSLEK KDDDSCTDCF KFAMTWSLLV SGFVHAFPIP FKIGKKRIHK MGDDENSLRK HGLKSKAAFV SRKEVRCQSV
201: ESVEKEGNPF SIECAVGFVV EMLAQNLQKL DQFIQDSSEN ESCCSKEASS NDSPLIFNIW EARKLDVNGF LGNLMFARVG DVASGIGGLT SHISEDGDES
301: NVSTAGKEES AVDSPQNLAT GLLSIPLSNV ERLKSTLSTI SLTELIELLP QLGRPSRDHP DKKKLISVQD FFRYTESEGR RFFEELDRDG DGKVTLEDLE
401: IAMRRRKLPR RYAKEFMRRA RSHLFSKSFG WKQFLSLMEQ KEPTILRAYT SLCLTKSGTL KKSEILASLN NAGLPANEEN AIAMMRFLKA DTEESISYGH
501: FRNFMVLLPY ERLQDDPRNI WFEAATVVAV APPVALPAGD VLKSALAGGL ASALSTSLMH PIDTIKTRVQ ASTLSFPEVI AKLPEIGVRG VYRGSIPAIL
601: GQFSSHGLRT GIFEASKLVL INFAPNLPEI QVQSIASFCS TLLGTAVRIP CEVLKQRLQA GMFNNVGEAI VGTWKQDGPS GFFRGTGATL CREVPLYVVG
701: MGLYAESKKM VAQALGRELE AWETIAVGAV SGGIAAVVTT PFDVMKTRMM TATPGRPISM SMVVVSILRN EGPLGLFKGA VPRFFWVAPL GAMNFAGYEL
801: AKKAMQKNED AVLADQLGQK KLC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)