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AT1G74910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.810
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:12154131 (2002): peroxisome
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ADP-glucose pyrophosphorylase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8966 Blast hits to 8959 proteins in 2015 species: Archae - 647; Bacteria - 5765; Metazoa - 388; Fungi - 304; Plants - 435; Viruses - 0; Other Eukaryotes - 1427 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G74910-MONOMERBioCyc:ARA:GQT-178-MONOMERDNASU:843830eggNOG:COG1208
eggNOG:KOG1460EMBL:AC013258EMBL:AF372967EMBL:AY124853
EMBL:CP002684EnsemblPlants:AT1G74910EnsemblPlants:AT1G74910.1EnsemblPlants:AT1G74910.2
entrez:843830ExpressionAtlas:Q9C9P3Gene3D:3.90.550.10GeneID:843830
GO:GO:0005777GO:GO:0005829GO:GO:0009058GO:GO:0016779
GO:GO:0046686GO:GO:2000082Gramene:AT1G74910.1Gramene:AT1G74910.2
hmmpanther:PTHR22572hmmpanther:PTHR22572:SF104HOGENOM:HOG000283479IntAct:Q9C9P3
InterPro:IPR001451InterPro:IPR005835InterPro:IPR029044KEGG:ath:AT1G74910
KO:K00966OMA:RLYLNQYPfam:PF00132Pfam:PF00483
PhylomeDB:Q9C9P3PIR:G96778Proteomes:UP000006548RefSeq:NP_177629.1
RefSeq:NP_849886.1SMR:Q9C9P3STRING:3702.AT1G74910.1SUPFAM:SSF53448
TAIR:AT1G74910UniGene:At.20977UniGene:At.66952UniProt:Q9C9P3
Coordinates (TAIR10) chr1:-:28135770..28138456
Molecular Weight (calculated) 45566.30 Da
IEP (calculated) 7.24
GRAVY (calculated) 0.05
Length 415 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSSMEEKVV AVIMVGGPTK GTRFRPLSLN IPKPLFPIAG QPMVHHPISA CKRIPNLAQI YLVGFYEERE FALYVSAISN ELKVPVRYLR EDKPHGSAGG
101: LYHFRNLIME DSPSHIFLLN CDVCCSFPLP KMLEAHRGYG GIGTLLVIKV SPESASQFGE LVADPVTNEL LHYTEKPETF VSDRINCGVY VFTPEIFNAI
201: GDVSTQRKDR ATLKRVSSFE ALQPATRIPT DFVRLDQDIL SPLAGKKRLY TYETMDFWEQ IKSPGMSLRC SGLYLSQFRL TSPQLLASGD GTRSAIVIGD
301: VYIHPSAKVH PTAKIGPNVS ISANARVGPG VRLMSCIILD DVEIMENAVV TNAIVGWKSS IGRWSRVQAE GVYNSKLGVT ILGDSVAVED EVVVTSSIVL
401: PNKTLNVSVQ DEIIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)