AT1G74910.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.810 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : ADP-glucose pyrophosphorylase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8966 Blast hits to 8959 proteins in 2015 species: Archae - 647; Bacteria - 5765; Metazoa - 388; Fungi - 304; Plants - 435; Viruses - 0; Other Eukaryotes - 1427 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:28135770..28138456 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 45566.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.24 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.05 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 415 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGSSMEEKVV AVIMVGGPTK GTRFRPLSLN IPKPLFPIAG QPMVHHPISA CKRIPNLAQI YLVGFYEERE FALYVSAISN ELKVPVRYLR EDKPHGSAGG 101: LYHFRNLIME DSPSHIFLLN CDVCCSFPLP KMLEAHRGYG GIGTLLVIKV SPESASQFGE LVADPVTNEL LHYTEKPETF VSDRINCGVY VFTPEIFNAI 201: GDVSTQRKDR ATLKRVSSFE ALQPATRIPT DFVRLDQDIL SPLAGKKRLY TYETMDFWEQ IKSPGMSLRC SGLYLSQFRL TSPQLLASGD GTRSAIVIGD 301: VYIHPSAKVH PTAKIGPNVS ISANARVGPG VRLMSCIILD DVEIMENAVV TNAIVGWKSS IGRWSRVQAE GVYNSKLGVT ILGDSVAVED EVVVTSSIVL 401: PNKTLNVSVQ DEIIL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)