AT2G35630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.569 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
MICROTUBULE ORGANIZATION 1 (MOR1); CONTAINS InterPro DOMAIN/s: HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28155.1); Has 1070 Blast hits to 718 proteins in 196 species: Archae - 0; Bacteria - 4; Metazoa - 490; Fungi - 304; Plants - 106; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14966828..14980361 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 217562.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.63 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1978 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSTEDEKLLK EAKKLPWEDR LGHKNWKVRN EANVDLASVF DSITDPKDPR LRDFGHLFRK TVADSNAPVQ EKALDALIAF LRAADSDAGR YAKEVCDAIA 0101: LKCLTGRKNT VDKAQAAFLL WVELEAVDVF LDTMEKAIKN KVAKAVVPAV DVMFQALSEF GSKVIPPKRI LKMLPELFDH QDQNVRASAK GVTLELCRWI 0201: GKDPVKSILF EKMRDTMKKE LEAELANVTA GAKPTRKIRS EQDKEPEAEA SSDVVGDGPS EEAVADAPQE IDEYDLMDPV DILTPLEKSG FWDGVKATKW 0301: SERKEAVAEL TKLASTKKIA PGDFSEICRT LKKLITDVNL AVAVEAIQAI GNLACGLRTH FSASSRFMLP VLLEKLKEKK QSVTDPLTQT LQTMYKAGCL 0401: NLVDVIEDVK TAVKNKVPLV RSSTLTWLTF CLETSNKALI LKAHKEYVPL CMECLNDGTP DVRDAAFSAL AAIAKSVGMR PLERSLEKLD DVRKKKLSEM 0501: IAGSGGGDQA GTSSVTVQSS VGSTATGNSD ASFVRKSAAS MLSGKRPAPS AQASKKVGTG KPGGGKKDGS VRNEGSKSVE PPEDVEPAEM GLEEIENRLG 0601: SLVKPETVSQ LKSSVWKERL EATLALKEEI EGLQELDKSV EILVRLLCAV PGWNEKNVQV QQQVIEIITY ISSTAAKFPK KCVVLCITGT SERVADIKTR 0701: ASAMKCLTAF CEAVGPGFVF ERLFKIMKEH KNPKVLSEGL LWMVSAVDDF GVSLLKLKDL IDFCKDVGLQ SSTAATRNAT IKLLGALHKF VGPDIKGFLN 0801: DVKPALLSAL DTEYEKNPFE GTAAPKRVVK TSVSTSTSSG GLDSLPREDI STKITPNLLK GFESPDWKMR LESIEAVNKI LEEANKRIQP TGTGELFGGL 0901: RGRLLDSNKN LVMQTLTTIG GVAAAMGPAV EKASKGILSD VLKCLGDNKK HMRECTLAAL DLWLGAVHLD KMIPYIIIAL TDGKMGAEGR KDLFDWLTKQ 1001: LTGLSDFVDA IHLLKPASTA MTDKSADVRK AAEGCISEIL RVSGQEMIEK NLKDIQGPAL ALVLEKVRPG FVQEPFESSK AMAGPVSKGV TKISKSTSNG 1101: TLKQGNRSRA VPTKGSSQIT SVHDIAIQSQ ALLNTKDSNK EDRERVVVRR IKFEELRPEQ IQDLENDMMK FFREDLQKRL LSPDFKKQVD GLEILQKALP 1201: SVSKEIIEVL DVLLRWFVLQ FCKSNTTCLL KVLEFLPELF NTLRDEEYCM TEAEAAIFLP CLAEKLGHNI EKVREKMREL MKQIIQAYSV GKTYPYILEG 1301: LRSKNNRTRI ECTDLIGYLL ETCGTEIGGL LKYLNIVASL TAERDGELRK AALNTMATGY QILGADIWKY VGKLTDAQKS MIDDRFKWKA KDMEKRREGK 1401: PGEARAALRR SVRDSGPEVA EQSGDISQTV PGPLFPRQSY GISEQMLERT PVPRTIAGVN GPTDWNEALD IIMFGSPEQS VEGMKVVCHE LAQASNDPEE 1501: SAIDELVKDA DGLVSCLANK VAKTFDVSLM GASSRSCKYV LNTLMQTFQN KKLAHAVKEG TLESLITELL LWLLDERVPR MEDGSQLLKA LNVLMLKILD 1601: NADRTSSFVV LISLLRPLDP SRWPSPATAE VYAVRNQKFS DLVVKCLIKL TKLLQSTIYE VDLDRLLQSI HVYLQDLGME EIRRRAGADD KPLRMVKTVL 1701: HELVKLRGAA IKGHLSLVPI DMRPQPIILA YIDLNLETLA AARMLTATGP VGQTHWTDST ANNPSPPANS ADVQLKQELG AIFKKIGDKQ TSTIGLYDLY 1801: HITKSYPKVD IFSQLQNASE AFRTYIRDGL AQVEKNAAAG RTPSSLPLST PPPSSLALPS PDIPSLSSLD VKPLMNPRSD LYTDDIRASN MNPGVMTGTL 1901: DAIRERMKNM QLASSEPVSK PLMPTNDNLS MNQQSVPPSQ MGQETVHTHP VVLPMDEKAL SGLQARMERL KGGSLEHM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)