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AT2G32660.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.843
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor like protein 22
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
receptor like protein 22 (RLP22); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 27 (TAIR:AT2G33060.1); Has 72946 Blast hits to 23279 proteins in 925 species: Archae - 37; Bacteria - 3607; Metazoa - 12485; Fungi - 751; Plants - 51027; Viruses - 14; Other Eukaryotes - 5025 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG0619EMBL:AK228145EMBL:CP002685
EnsemblPlants:AT2G32660EnsemblPlants:AT2G32660.1entrez:817826Gene3D:3.80.10.10
GeneID:817826Gramene:AT2G32660.1hmmpanther:PTHR27004hmmpanther:PTHR27004:SF37
InterPro:IPR001611InterPro:IPR003591InterPro:IPR032675KEGG:ath:AT2G32660
OMA:PMSFANVPfam:PF13855PhylomeDB:Q0WRZ8Proteomes:UP000006548
RefSeq:NP_180825.2SMART:SM00369SMR:Q0WRZ8STRING:3702.AT2G32660.1
SUPFAM:SSF52058TAIR:AT2G32660tair10-symbols:AtRLP22tair10-symbols:RLP22
UniGene:At.38038UniProt:Q0WRZ8
Coordinates (TAIR10) chr2:-:13853897..13855666
Molecular Weight (calculated) 65683.00 Da
IEP (calculated) 4.74
GRAVY (calculated) -0.15
Length 589 amino acids
Sequence (TAIR10)
(BLAST)
001: MPFLSYLDLS ENHLTGSFEI SNSSSKLENL NLGNNHFETE IIDPVLRLVN LRYLSLSFLN TSHPIDLSIF SPLQSLTHLD LHGNSLTLTS VYSDIDFPKN
101: MEILLLSGCN ISEFPRFLKS LKKLWYLDLS SNRIKGNVPD WIWSLPLLVS LDLSNNSFTG FNGSLDHVLA NSSVQVLDIA LNSFKGSFPN PPVSIINLSA
201: WNNSFTGDIP LSVCNRTSLD VLDLSYNNFT GSIPPCMGNF TIVNLRKNKL EGNIPDEFYS GALTQTLDVG YNQLTGELPR SLLNCSFIRF LSVDHNRIND
301: SFPLWLKALP NLKVLTLRSN SFHGPMSPPD DQSSLAFPKL QILEISHNRF TGSLPTNYFA NWSVKSLKMY DEERLYMGDY SSDRFVYEDT LDLQYKGLYM
401: EQGKVLTFYS AIDFSGNKLE GEIPESIGLL KTLIALNLSN NSFTGHIPMS FANVTELESL DLSGNKLSGE IPQELGRLSY LAYIDVSDNQ LTGKIPQGTQ
501: IIGQPKSSFE GNSGLCGLPL EESCLREDAP STQEPEEEEE EILEWRAAAI GYGPGVLFGL AIGHVVALYK PGWFIKNNGQ NRLRGIRHP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)