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AT2G32250.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : FAR1-related sequence 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FAR1-related sequence 2 (FRS2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527), MULE transposase, conserved domain (InterPro:IPR018289), Transcription factor, FAR1-related (InterPro:IPR004330), Zinc finger, PMZ-type (InterPro:IPR006564); BEST Arabidopsis thaliana protein match is: far-red elongated hypocotyls 3 (TAIR:AT3G22170.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKUCeggNOG:ENOG4111AZTEMBL:AC005700EMBL:AK221503
EMBL:AK228730EMBL:CP002685EnsemblPlants:AT2G32250EnsemblPlants:AT2G32250.1
EnsemblPlants:AT2G32250.3entrez:817785GeneID:817785Genevisible:Q3EBQ3
GO:GO:0005634GO:GO:0006355GO:GO:0008270hmmpanther:PTHR31669
hmmpanther:PTHR31669:SF48HOGENOM:HOG000090708InParanoid:Q3EBQ3InterPro:IPR004330
InterPro:IPR006564InterPro:IPR007527InterPro:IPR018289InterPro:IPR031052
KEGG:ath:AT2G32250OMA:QRFNDLCPANTHER:PTHR31669PaxDb:Q3EBQ3
Pfam:PF03101Pfam:PF04434Pfam:PF10551Pfam:Q3EBQ3
Pfscan:PS50966PhylomeDB:Q3EBQ3PIR:G84730PRIDE:Q3EBQ3
PRO:PR:Q3EBQ3PROSITE:PS50966Proteomes:UP000006548RefSeq:NP_001077991.1
RefSeq:NP_001118431.1RefSeq:NP_180784.2RefSeq:NP_973580.1SMART:SM00575
TAIR:AT2G32250tair10-symbols:FRS2UniGene:At.13189UniGene:At.67147
UniProt:Q3EBQ3
Coordinates (TAIR10) chr2:+:13693518..13696783
Molecular Weight (calculated) 91972.80 Da
IEP (calculated) 6.54
GRAVY (calculated) -0.48
Length 807 amino acids
Sequence (TAIR10)
(BLAST)
001: MDDEDVEIDL LTKSSNVDVF CEASTSGNVA QCATVSELRN GMDFESKEAA YYFYREYARS VGFGITIKAS RRSKRSGKFI DVKIACSRFG TKREKATAIN
101: PRSCPKTGCK AGLHMKRKED EKWVIYNFVK EHNHEICPDD FYVSVRGKNK PAGALAIKKG LQLALEEEDL KLLLEHFMEM QDKQPGFFYA VDFDSDKRVR
201: NVFWLDAKAK HDYCSFSDVV LFDTFYVRNG YRIPFAPFIG VSHHRQYVLL GCALIGEVSE STYSWLFRTW LKAVGGQAPG VMITDQDKLL SDIVVEVFPD
301: VRHIFCLWSV LSKISEMLNP FVSQDDGFME SFGNCVASSW TDEHFERRWS NMIGKFELNE NEWVQLLFRD RKKWVPHYFH GICLAGLSGP ERSGSIASHF
401: DKYMNSEATF KDFFELYMKF LQYRCDVEAK DDLEYQSKQP TLRSSLAFEK QLSLIYTDAA FKKFQAEVPG VVSCQLQKER EDGTTAIFRI EDFEERQNFF
501: VALNNELLDA CCSCHLFEYQ GFLCKHAILV LQSADVSRVP SQYILKRWSK KGNNKEDKND KCATIDNRMA RFDDLCRRFV KLGVVASLSD EACKTALKLL
601: EETVKHCVSM DNSSKFPSEP DKLMTGGSIG LENEGVLDCA SKVSKKKKIQ KKRKVYCGPE DATNRSEELR QETEQVSSRA PTFENCYIPQ ANMEEPELGS
701: RATTLGVYYS TQQTNQGFPS ISSIQNGYYG HPPTIQAMGN LHSIHERMSQ YETQPSMQGA FQGQTGFRGS AIRGCYDIEE TLHDMTMGSS QFQGSDSSHP
801: SDHRLSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)