AT2G23470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function, DUF647 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ROOT UV-B SENSITIVE 4 (RUS4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1); Has 409 Blast hits to 406 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 58; Plants - 179; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:9999105..10001398 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58623.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.56 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||
| Length | 520 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHSTNQSSRL FQYPCKSTST QYPIFIFPKF SSRKFVKSLR TSIDYKQEGA SKEDLVVPSN VARRLPIIIK KSGKVSRYFI KGDSLELLCV DEEEDDSTSF 101: CLGLDDGFWK LIRLTSSAAK DFFLPKQVSD NYISYVKWKF LHRVFSSALQ VLATQAMFRA IGIGQSRSLA SSAAFNWILK DGLGRLSRCI YTASLASAFD 201: TNLKRVRFST SVLFSLSIGV ELMTPVFPQY FLLLASIANI AKQISLSCYL ATGSAVHRSF AVADNLGEVS AKAQIQTVCF DNLGLLLAVL LNMLFQHNQR 301: LQACLPFVLY PIFSTFDLLG IYQGLKHINL QTLTKDRLEI ILERWIEFRQ VPSPAEVSEE EGIGLLGSRG SKRVWPIRIG CLDPKAQIPT LSMMAMQSLC 401: SDDGYFITME LSSQGFRRIP KSGIVICLRE GANSVDVITS LLQTCYIRKS LGANRTKRSY LSFSDLTLQD WTLLTRESKR AARDDNIALN KQMQEQGWIV 501: KNVLLSAEEQ IRYIFDKNQL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)