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AT2G22900.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Galactosyl transferase GMA12/MNN10 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT4G37690.1); Has 459 Blast hits to 458 proteins in 96 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 139; Plants - 283; Viruses - 4; Other Eukaryotes - 29 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G22900-MONOMERCAZy:GT34EC:2.4.-.-eggNOG:ENOG410XSJS
eggNOG:KOG4748EMBL:AC004786EMBL:AJ245572EMBL:AY035024
EMBL:AY059095EMBL:CP002685EMBL:KJ138905EnsemblPlants:AT2G22900
EnsemblPlants:AT2G22900.1entrez:816821ExpressionAtlas:O81007GeneID:816821
Genevisible:O81007GO:GO:0000139GO:GO:0005768GO:GO:0005794
GO:GO:0005802GO:GO:0008378GO:GO:0010192GO:GO:0010214
GO:GO:0010392GO:GO:0016021GO:GO:0051070Gramene:AT2G22900.1
hmmpanther:PTHR31311hmmpanther:PTHR31311:SF3HOGENOM:HOG000239436InParanoid:O81007
InterPro:IPR008630KEGG:ath:AT2G22900OMA:KAINFADPaxDb:O81007
Pfam:O81007Pfam:PF05637PhylomeDB:O81007PIR:C84618
PRIDE:O81007PRO:PR:O81007ProteinModelPortal:O81007Proteomes:UP000006548
RefSeq:NP_565544.1SMR:O81007STRING:3702.AT2G22900.1TAIR:AT2G22900
TMHMM:TMhelixUniGene:At.48507UniGene:At.72791UniProt:O81007
UniProt:W8Q3G3
Coordinates (TAIR10) chr2:-:9744359..9746193
Molecular Weight (calculated) 52077.70 Da
IEP (calculated) 7.02
GRAVY (calculated) -0.50
Length 449 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)