AT2G22590.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 0.666 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G65550.1); Has 5420 Blast hits to 5242 proteins in 247 species: Archae - 0; Bacteria - 62; Metazoa - 299; Fungi - 20; Plants - 5019; Viruses - 2; Other Eukaryotes - 18 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:9593012..9594424 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 53599.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.20 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 470 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MTNFKDNDGD GTKLHVVMFP WLAFGHMVPY LELSKLIAQK GHKVSFISTP RNIDRLLPRL PENLSSVINF VKLSLPVGDN KLPEDGEATT DVPFELIPYL 101: KIAYDGLKVP VTEFLESSKP DWVLQDFAGF WLPPISRRLG IKTGFFSAFN GATLGILKPP GFEEYRTSPA DFMKPPKWVP FETSVAFKLF ECRFIFKGFM 201: AETTEGNVPD IHRVGGVIDG CDVIFVRSCY EYEAEWLGLT QELHRKPVIP VGVLPPKPDE KFEDTDTWLS VKKWLDSRKS KSIVYVAFGS EAKPSQTELN 301: EIALGLELSG LPFFWVLKTR RGPWDTEPVE LPEGFEERTA DRGMVWRGWV EQLRTLSHDS IGLVLTHPGW GTIIEAIRFA KPMAMLVFVY DQGLNARVIE 401: EKKIGYMIPR DETEGFFTKE SVANSLRLVM VEEEGKVYRE NVKEMKGVFG DMDRQDRYVD SFLEYLVTNR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)