AT2G18630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF677) | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF677); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66675.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:8081154..8082496 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45008.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.37 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||
| Length | 393 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMGGKSSKSK KNVEFGSPST PVQIKINSEY TEHLSSYERA CSEDPKLESF DSALHERTNR VINKLASGVE IKSLSFDSLR EVTQCLLDMN QDVVKVILQD 101: KEDIWNNQDL FSLVNLYFES TAKTMDFCSE LENCLNRARR SQVIIQFAVN QFEEENEDKE NRKYEKTLEE LKRFKVAGEP FTKEFFALFD LVYKQQVMML 201: EELHKLKRKL DKRLRNIKTW RRVSNMVFVT AFVSVLIFSV VAAAVAAPPV VAAIAGALAV PVGSVGKWCN TLWTKYEKVV RGQKEIITSI RIGTYISVKE 301: MDNISILVRK VEVEIESLLK KAEFAITEEK EVRLAIDEIK KKLDVFTETI EELGEHAGKY CSDVTKARTV ILQRIIRYPA GSPKDEAPWT EMM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)