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AT2G18196.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.588
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Heavy metal transport/detoxification superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT4G10465.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2608eggNOG:KOG1603EMBL:CP002685EnsemblPlants:AT2G18196
EnsemblPlants:AT2G18196.1entrez:816334GeneID:816334GO:GO:0030001
GO:GO:0046872Gramene:AT2G18196.1hmmpanther:PTHR22814hmmpanther:PTHR22814:SF136
InParanoid:F4IQG4InterPro:IPR006121KEGG:ath:AT2G18196OMA:FHDEESY
PaxDb:F4IQG4Pfam:PF00403Pfscan:PS50846PRIDE:F4IQG4
PROSITE:PS50846ProteinModelPortal:F4IQG4Proteomes:UP000006548RefSeq:NP_849973.3
SMR:F4IQG4STRING:3702.AT2G18196.1SUPFAM:SSF55008TAIR:AT2G18196
UniGene:At.50080UniProt:F4IQG4
Coordinates (TAIR10) chr2:-:7920793..7922268
Molecular Weight (calculated) 21069.30 Da
IEP (calculated) 9.81
GRAVY (calculated) -0.61
Length 178 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFGSFISTI TYCLFFRYPH KKPKFKSVSH LNHYHTMPMA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL EMERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)