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AT2G16890.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.530
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213), Tudor subgroup (InterPro:IPR018351); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G14860.1); Has 3273 Blast hits to 3253 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1819eggNOG:KOG1192EMBL:KJ138912EnsemblPlants:AT2G16890
EnsemblPlants:AT2G16890.1entrez:816190ExpressionAtlas:W8PV22GeneID:816190
GO:GO:0016758Gramene:AT2G16890.1hmmpanther:PTHR11926hmmpanther:PTHR11926:SF250
InterPro:IPR002213InterPro:IPR002999PANTHER:PTHR11926PaxDb:W8PV22
Pfscan:PS50304PhylomeDB:W8PV22PROSITE:PS50304ProteinModelPortal:W8PV22
RefSeq:NP_850992.1SUPFAM:SSF53756UniGene:At.26351UniGene:At.71770
UniProt:W8PV22
Coordinates (TAIR10) chr2:+:7316938..7317876
Molecular Weight (calculated) 35188.00 Da
IEP (calculated) 6.44
GRAVY (calculated) -0.25
Length 312 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVSTHHHHV VLFPFMSKGH IIPLLQFGRL LLRHHRKEPT ITVTVFTTPK NQPFISDFLS DTPEIKVISL PFPENITGIP PGVENTEKLP SMSLFVPFTR
101: ATKLLQPFFE ETLKTLPKVS FMVSDGFLWW TSESAAKFNI PRFVSYGMNS YSAAVSISVF KHELFTEPES KSDTEPVTVP DFPWIKVKKC DFDHGTTEPE
201: ESGAALELSM DQIKSTTTSH GFLVNSFYEL ESAFVDYNNN SGDKPKSWCV GPLCLTDPPK QGSAKPAWIH WLDQKREEGR PVLYVAFGTQ AEISNKQLME
301: LAFGLEDSKV RT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)