AT2G15320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat (LRR) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G66330.1); Has 72264 Blast hits to 25708 proteins in 980 species: Archae - 21; Bacteria - 3279; Metazoa - 16942; Fungi - 630; Plants - 47007; Viruses - 0; Other Eukaryotes - 4385 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:6666527..6667675 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41223.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.31 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.00 | ||||||||||||||||||||||||||||||||||||
| Length | 382 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTCLLLLLLL LLFSSADSLT SPSDVSALKA FKATVKPNSI PPWSCLASWD FTVSDPCASP RRTHFTCGIT CSSDSTRVTQ LTLDPAGYTG RLTPLISGLT 101: ELLTLDLAEN NFYGLIPSSI SSLTSLKTLI LRSNSFSGSL PDSVTRLNSL ESIDISHNSL TGPLPKTMNS LSNLRQLDLS YNKLTGAIPK LPKNLIDLAL 201: KANTLSGPIS KDSFTESTQL EIVEIAENSF TGTLGAWFFL LESIQQVDLA NNTLTGIEVL PPNLAGENNL VAVELGFNQI RGNAPASFAA YPRLSSLSMR 301: YNVLHGVIPS EYERSKTLRR LYLDGNFLTG KPPARFVRTD AEVMGSLGNN CLQGCPGKAK MCAPSQKPFY ICKQAYGGKP KS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)