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AT2G01670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.926
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nudix hydrolase homolog 17
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nudix hydrolase homolog 17 (NUDT17); FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 18 (TAIR:AT1G14860.1); Has 1036 Blast hits to 1035 proteins in 308 species: Archae - 0; Bacteria - 361; Metazoa - 217; Fungi - 119; Plants - 237; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G01670-MONOMEREC:3.6.1.-eggNOG:COG0494eggNOG:KOG2839
EMBL:AC006069EMBL:AF325062EMBL:AF360131EMBL:AF412103
EMBL:AY051030EMBL:AY088595EMBL:CP002685EnsemblPlants:AT2G01670
EnsemblPlants:AT2G01670.1entrez:814696Gene3D:3.90.79.10GeneID:814696
Genevisible:Q9ZU95GO:GO:0005739GO:GO:0016787GO:GO:0046872
Gramene:AT2G01670.1hmmpanther:PTHR12629hmmpanther:PTHR12629:SF4HOGENOM:HOG000165198
InParanoid:Q9ZU95InterPro:IPR000086InterPro:IPR015797KEGG:ath:AT2G01670
OMA:LGNVEHQPaxDb:Q9ZU95Pfam:PF00293Pfam:Q9ZU95
Pfscan:PS51462PhylomeDB:Q9ZU95PIR:F84427PRIDE:Q9ZU95
PRO:PR:Q9ZU95PROSITE:PS51462ProteinModelPortal:Q9ZU95Proteomes:UP000006548
RefSeq:NP_565273.1SMR:Q9ZU95STRING:3702.AT2G01670.1SUPFAM:SSF55811
TAIR:AT2G01670tair10-symbols:atnudt17tair10-symbols:NUDT17UniGene:At.25360
UniProt:Q9ZU95
Coordinates (TAIR10) chr2:-:296889..297818
Molecular Weight (calculated) 21053.40 Da
IEP (calculated) 5.41
GRAVY (calculated) -0.48
Length 182 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVEKMVCLA SRTGRQFQRY NKGRRQVVGC VPYRFKLSND GKISDEVEVL VISSQKGHAL MFPKGGWELD ESVEEAASRE CLEEAGVLGN VEHQLGKWDF
101: LSKSRGTYYE GLMFPMLVTE QLELWPEQHV RQRIWMNVTE AREACRDWWM KEALDVLVER LSSPMNQPKE EKTMSISIET MC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)