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AT3G60690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SAUR-like auxin-responsive protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G45210.1); Has 1342 Blast hits to 1328 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1341; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2ZReggNOG:ENOG410YVYPEMBL:AF380639EMBL:AL162295
EMBL:AY054135EMBL:CP002686EnsemblPlants:AT3G60690EnsemblPlants:AT3G60690.1
entrez:825240GeneID:825240GO:GO:0009733Gramene:AT3G60690.1
hmmpanther:PTHR31374hmmpanther:PTHR31374:SF56HOGENOM:HOG000238628InterPro:IPR003676
KEGG:ath:AT3G60690KO:K14488OMA:IKIRRPIPfam:PF02519
PhylomeDB:Q9LZZ4PIR:T47880Proteomes:UP000006548RefSeq:NP_191628.1
STRING:3702.AT3G60690.1TAIR:AT3G60690UniGene:At.20817UniProt:Q9LZZ4
Coordinates (TAIR10) chr3:+:22435262..22435774
Molecular Weight (calculated) 19786.20 Da
IEP (calculated) 11.43
GRAVY (calculated) -0.60
Length 170 amino acids
Sequence (TAIR10)
(BLAST)
001: MRKLRGIKIR RPIKQISRWI LRRIKIRRSR YTRLSPNRPV CKPRAITKLI SWGRSLTSHS ARFIGSKCSN SGYIPIGQEP IREKPDPVPK GHSAVYIGKK
101: DGDFQRVLVP IVYFNHPLFG ELLREAEEEF GFSQEGGITI PCPYSDFKRV QTRIESGSGF CKFPWSRRWQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)