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AT1G16510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.992
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SAUR-like auxin-responsive protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G12830.1); Has 1122 Blast hits to 1120 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1121; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JXTJeggNOG:ENOG41103P4EMBL:AC006341EMBL:AF348577
EMBL:AK117413EMBL:AK227586EMBL:BT003061EMBL:CP002684
EnsemblPlants:AT1G16510EnsemblPlants:AT1G16510.1entrez:838221GeneID:838221
Genevisible:Q9SA49GO:GO:0005737GO:GO:0009734GO:GO:0009958
GO:GO:0016049GO:GO:0040008GO:GO:0060918GO:GO:0090057
Gramene:AT1G16510.1hmmpanther:PTHR31374hmmpanther:PTHR31374:SF37HOGENOM:HOG000238628
InParanoid:Q9SA49InterPro:IPR003676KEGG:ath:AT1G16510KO:K14488
OMA:NTVPAGHPaxDb:Q9SA49Pfam:PF02519Pfam:Q9SA49
PhylomeDB:Q9SA49PIR:F86300PRIDE:Q9SA49PRO:PR:Q9SA49
Proteomes:UP000006548RefSeq:NP_173100.1TAIR:AT1G16510UniGene:At.11323
UniProt:Q9SA49
Coordinates (TAIR10) chr1:-:5644784..5645227
Molecular Weight (calculated) 16479.80 Da
IEP (calculated) 8.28
GRAVY (calculated) -0.22
Length 147 amino acids
Sequence (TAIR10)
(BLAST)
001: MKHLIRRLSR VADSSSEFSI RRSTSSFRNR RGHHRLHAPP PPWSICPARR VNTVPAGHVP VYVGEEMERF VVSAELMNHP IFVGLLNRSA QEYGYAQKGV
101: LHIPCHVIVF ERVVETLRLG GFEGSGDLEN LVASLLSGDE LIPETTE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)