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AT3G51860.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.963
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cation exchanger 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cation exchanger 3 (CAX3); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.1); Has 3567 Blast hits to 3405 proteins in 1022 species: Archae - 24; Bacteria - 2167; Metazoa - 14; Fungi - 725; Plants - 252; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink).
Protein Annotations
BioGrid:9667eggNOG:COG0387eggNOG:KOG1397EMBL:AF049236
EMBL:AF256228EMBL:AK226999EMBL:AY058054EMBL:BT020374
EMBL:CP002686EnsemblPlants:AT3G51860EnsemblPlants:AT3G51860.1entrez:824349
GeneID:824349Genevisible:Q93Z81GO:GO:0005773GO:GO:0005774
GO:GO:0006793GO:GO:0006874GO:GO:0006882GO:GO:0009624
GO:GO:0009705GO:GO:0015369GO:GO:0016021GO:GO:0030026
GO:GO:0051592GO:GO:0055062GO:GO:0070588Gramene:AT3G51860.1
hmmpanther:PTHR31503hmmpanther:PTHR31503:SF1HOGENOM:HOG000083011InParanoid:Q93Z81
IntAct:Q93Z81InterPro:IPR004713InterPro:IPR004798InterPro:IPR004837
KEGG:ath:AT3G51860KO:K07300OMA:IAAQCFRPaxDb:Q93Z81
Pfam:PF01699Pfam:Q93Z81PhylomeDB:Q93Z81PIR:T51157
PRIDE:Q93Z81PRO:PR:Q93Z81ProteinModelPortal:Q93Z81Proteomes:UP000006548
RefSeq:NP_190754.2SMR:Q93Z81STRING:3702.AT3G51860.1TAIR:AT3G51860
tair10-symbols:ATCAX3tair10-symbols:ATHCX1tair10-symbols:CAX1-LIKEtair10-symbols:CAX3
TCDB:2.A.19.2.5TIGRfam:TIGR00378TIGRfam:TIGR00846TIGRFAMs:TIGR00378
TIGRFAMs:TIGR00846TMHMM:TMhelixUniGene:At.11926UniProt:Q93Z81
Coordinates (TAIR10) chr3:+:19239458..19242519
Molecular Weight (calculated) 49854.40 Da
IEP (calculated) 5.40
GRAVY (calculated) 0.60
Length 459 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)