AT1G78690.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : Phospholipid/glycerol acyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Tafazzin (InterPro:IPR000872); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.2); Has 1059 Blast hits to 1041 proteins in 400 species: Archae - 0; Bacteria - 447; Metazoa - 249; Fungi - 138; Plants - 116; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr1:+:29597002..29598409 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 31744.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.84 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 284 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGKIMEWAAR SDHLGGIPRN TVIMAVSAFA KAVANLCNKS SVHNADTLMN LVQSRPPGVP LITVSNHMST LDDPVMWGAF KGLLSLDPEL ARWVLAAEDI 101: CFRNPIFSYI FRTGKCIPIT RGGGIYQENM NEALQRLKDG SWLHTFPEGK VFQDDVPIRR LKWGTASLIA RSPVTPIVLP IIHRGFEEMM PENYNNGRRP 201: LVPLPNKHLK VVVGEPIEFD VPMMVETAVL DSRHVTPPLQ EVKWPVLTSA GQVLDETAQR HLYIALSEKI QSSLETLRLL AKRL |
||||||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)