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AT1G78690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phospholipid/glycerol acyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Tafazzin (InterPro:IPR000872); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.2); Has 1059 Blast hits to 1041 proteins in 400 species: Archae - 0; Bacteria - 447; Metazoa - 249; Fungi - 138; Plants - 116; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).
Protein Annotations
EC:2.3.1.-eggNOG:ENOG410XT5TeggNOG:KOG2847EMBL:AC005679
EMBL:AY045874EMBL:CP002684EnsemblPlants:AT1G78690EnsemblPlants:AT1G78690.1
entrez:844205GeneID:844205Genevisible:Q9ZV87GO:GO:0005886
GO:GO:0006650GO:GO:0008374GO:GO:0008654GO:GO:0016021
GO:GO:0016746GO:GO:0031224Gramene:AT1G78690.1hmmpanther:PTHR12497
hmmpanther:PTHR12497:SF1HOGENOM:HOG000000693InParanoid:Q9ZV87InterPro:IPR000872
InterPro:IPR002123KEGG:ath:AT1G78690KO:K13511OMA:LCGKDIQ
PANTHER:PTHR12497PaxDb:Q9ZV87Pfam:PF01553Pfam:Q9ZV87
PhylomeDB:Q9ZV87PIR:G96815PRIDE:Q9ZV87PRINTS:PR00979
PRO:PR:Q9ZV87ProteinModelPortal:Q9ZV87Proteomes:UP000006548Reactome:R-ATH-1482798
RefSeq:NP_177990.1SMART:SM00563STRING:3702.AT1G78690.1SUPFAM:0039877
TAIR:AT1G78690UniGene:At.10893UniProt:Q9ZV87
Coordinates (TAIR10) chr1:+:29597002..29598409
Molecular Weight (calculated) 31744.90 Da
IEP (calculated) 8.84
GRAVY (calculated) -0.05
Length 284 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKIMEWAAR SDHLGGIPRN TVIMAVSAFA KAVANLCNKS SVHNADTLMN LVQSRPPGVP LITVSNHMST LDDPVMWGAF KGLLSLDPEL ARWVLAAEDI
101: CFRNPIFSYI FRTGKCIPIT RGGGIYQENM NEALQRLKDG SWLHTFPEGK VFQDDVPIRR LKWGTASLIA RSPVTPIVLP IIHRGFEEMM PENYNNGRRP
201: LVPLPNKHLK VVVGEPIEFD VPMMVETAVL DSRHVTPPLQ EVKWPVLTSA GQVLDETAQR HLYIALSEKI QSSLETLRLL AKRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)