AT1G75730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 327 Blast hits to 272 proteins in 89 species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi - 14; Plants - 20; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28435991..28438983 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 66030.40 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.36 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.76 | ||||||||||||||||||||||||
| Length | 589 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEMGRRDLMR RGTTNRFSNK QQSGSGFSTK SKKGMLKKLG FADEKLKQEM SYDTLPSPDL ENEVSKKKSK LPKKNLKDTN GVDHASVPRK LRSAMKKRNL 101: ESVSKLSSVS KRLNRFKTGT ESSVKKESQE MEAKAIVTES MMISKDEKEV AETLYGLAGM FTETDSLGKK TSNEKETSKV VDSILVVEDD YTKTESLTPV 201: VSVLSSAKTK QIDAMPLEQS DKQFNTTGMV DFIDRLKQSS SVKVTDAHAR VNETKVTTSN GLALWPGLSS TTVHSGAQVL SKPSSTKLPP WMGQAVSPSN 301: TASLLNCEPL RVQPRKLKRC ASHIYISRLI KVLQTSKSSL ATLNQNEQRY SEMSERRLPD SVITINDFKA IVSPPKRYQN PHLLDMHRAH NPKPVQEDMT 401: KLALELYGPH TSQKQSFDFL SLSSAGAAQS HFPLPNSFPQ YQISAAYNSQ LSPATSSHQV QQLSPYLASR FQTAYNANQQ QQQQLQKRLW AAQYRPTNGN 501: TMQSNQYSKP NLSLNLTSIQ QPLQVSSSPR YNHNVSQQQH RLMTAAAAMS MSHQHNNPSR AVMNRQEHHF PLIYEDTRTP LQLLCNEQS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)