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AT1G74780.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Nodulin-like / Major Facilitator Superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Nodulin-like / Major Facilitator Superfamily protein; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Nodulin-like / Major Facilitator Superfamily protein (TAIR:AT1G18940.1); Has 3116 Blast hits to 3052 proteins in 955 species: Archae - 29; Bacteria - 1753; Metazoa - 40; Fungi - 307; Plants - 604; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIX9eggNOG:ENOG410Y8WVEMBL:AC008263EMBL:CP002684
EnsemblPlants:AT1G74780EnsemblPlants:AT1G74780.1entrez:843817GeneID:843817
GO:GO:0016021GO:GO:0055085Gramene:AT1G74780.1hmmpanther:PTHR21576
hmmpanther:PTHR21576:SF33InterPro:IPR010658InterPro:IPR011701InterPro:IPR020846
KEGG:ath:AT1G74780OMA:HKKGWPRPfam:PF06813Pfam:PF07690
PhylomeDB:Q9SSG2PIR:B96777Proteomes:UP000006548RefSeq:NP_177616.1
STRING:3702.AT1G74780.1SUPFAM:SSF103473TAIR:AT1G74780TMHMM:TMhelix
UniGene:At.34842UniGene:At.67831UniProt:Q9SSG2
Coordinates (TAIR10) chr1:+:28095916..28097912
Molecular Weight (calculated) 57618.10 Da
IEP (calculated) 9.50
GRAVY (calculated) 0.57
Length 533 amino acids
Sequence (TAIR10)
(BLAST)
001: MEILRTKWVA MTASIWIQCA SGASYTFGIY SAVLKSTQSY DQSTLDTVSV FKDIGANAGV FSGLLYTYAT SNRLRGRGGG IGGAGGPWVV LAVGAIQCFA
101: GYFLIWASVT GLIRKPPVPL MCLFMFLAAQ SQTFFNTANV VSAVENFADY GGTAVGIMKG FLGLSGAILI QLYETLCAGD PASFILLLAV TPTVLSLLVM
201: PLVRIYETSV ADDKKHLNGL SAVSLIIAAY LMIIIILKNT FGLSSWANIV TLVCLLVMLA LPLLIARRAQ RDGMEKTVPH DYSPLISSPK ATTSGNQSSE
301: GDSKVEAGLS ENLNLLQAMK KLSFWLLFLA MICGMGSGLS TINNIRQIGE SLRYSSVEIN SLVSLWSIWN FLGRFGAGYA SDALLHKKGW PRPLLMAATL
401: GTMSIGHLII ASGFQGNLYV GSVIVGVCYG SQWSLMPTIT SELFGIRHMG TIFNTISVAS PIGSYIFSVR LIGYIYDKTA SGEGNTCYGS HCFRLSFIIM
501: ASVAFFGFLV AIVLFFRTKT LYRQILVKRL HHR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)