AT1G13900.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Purple acid phosphatases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 9 (TAIR:AT2G03450.1); Has 1738 Blast hits to 1720 proteins in 355 species: Archae - 1; Bacteria - 507; Metazoa - 197; Fungi - 77; Plants - 727; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:4753494..4755554 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 73721.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 656 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MIVNFSFFLL LFVSVFVSSA DSKATISISP NALNRSGDSV VIQWSGVDSP SDLDWLGLYS PPESPNDHFI GYKFLNESST WKDGFGSISL PLTNLRSNYT 101: FRIFRWSESE IDPKHKDHDQ NPLPGTKHLL AESEQLTFGS GVGMPEQIHL SFTNMVNTMR VMFVAGDGEE RFVRYGESKD LLGNSAAARG MRYEREHMCD 201: SPANSTIGWR DPGWIFDTVM KNLNDGVRYY YQVGSDSKGW SEIHSYIARD VTAEETVAFM FGDMGCATPY TTFIRTQDES ISTVKWILRD IEALGDKPAM 301: ISHIGDISYA RGYSWVWDEF FAQVEPIAST VPYHVCIGNH EYDFSTQPWK PDWAASIYGN DGGGECGVPY SLKFNMPGNS SESTGMKAPP TRNLYYSYDM 401: GTVHFVYIST ETNFLKGGSQ YEFIKRDLES VDRKKTPFVV VQGHRPMYTT SNEVRDTMIR QKMVEHLEPL FVKNNVTLAL WGHVHRYERF CPISNNTCGT 501: QWQGNPVHLV IGMAGQDWQP IWQPRPNHPD LPIFPQPEQS MYRTGEFGYT RLVANKEKLT VSFVGNHDGE VHDTVEMLAS GVVISGSKES TKIPNLKTVP 601: ASATLMGKSE SNALWYAKGA GLMVVGVLLG FIIGFFTRGK KSSSGNRWIP VKNEET |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)