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AT1G13640.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
peroxisome 0.667
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphatidylinositol 3- and 4-kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphatidylinositol 3- and 4-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: phosphoinositide 4-kinase gamma 7 (TAIR:AT2G03890.1); Has 641 Blast hits to 624 proteins in 172 species: Archae - 0; Bacteria - 6; Metazoa - 171; Fungi - 87; Plants - 282; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
Protein Annotations
EC:2.7.1.67eggNOG:ENOG410XP06eggNOG:KOG2381EMBL:AC027656
EMBL:AY060574EMBL:AY149944EMBL:CP002684EnsemblPlants:AT1G13640
EnsemblPlants:AT1G13640.1entrez:837925GeneID:837925Genevisible:Q8W4R8
GO:GO:0004430GO:GO:0005524Gramene:AT1G13640.1hmmpanther:PTHR15245
hmmpanther:PTHR15245:SF11HOGENOM:HOG000237755InParanoid:Q8W4R8InterPro:IPR000403
InterPro:IPR029071iPTMnet:Q8W4R8KEGG:ath:AT1G13640OMA:VSHKSAN
PaxDb:Q8W4R8Pfam:PF00454Pfam:Q8W4R8PhylomeDB:Q8W4R8
PIR:F86269PRIDE:Q8W4R8PRO:PR:Q8W4R8ProteinModelPortal:Q8W4R8
Proteomes:UP000006548RefSeq:NP_563930.1SMR:Q8W4R8STRING:3702.AT1G13640.1
SUPFAM:SSF54236TAIR:AT1G13640UniGene:At.27453UniGene:At.71901
UniProt:Q8W4R8
Coordinates (TAIR10) chr1:-:4677276..4679144
Molecular Weight (calculated) 69576.00 Da
IEP (calculated) 5.37
GRAVY (calculated) -0.41
Length 622 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMAVFKAPL KGEFHGARKM EGKQYKHHLL QQQSTGRRRV FVQTDTGCVL GVELDRNDNV HTVKKRLQIA FNFPTEESSL TFGDMVLKND LSAVRNDSPL
101: LLKRNLMHRS SSTPCLSPTG NDLQRKDRSG PIEILSHSPC FLSLKQTAND IVKAMKMGVE PIPVNGGLGG AYYFRDEKGQ SVAIVKPTDE EPFAPNNPKG
201: FVGKALGQPG LKPSVRVGET GFREVAAYLL DYDHFANVPP TALVKITHSV FNVNDGMDGN KSREKKKLVS SKIASFQKFV PHDFDASDHG TSSFPVASVH
301: RIGILDIRIL NTDRHGGNLL VKKLDDGGVG RFGQVELIPI DHGLCLPETL EDPYFEWIHW PQASIPFSEE ELDYIQSLDP VKDCEMLRRE LPMIREACLR
401: VLVLCTVFLK EAAVFGLCLA EIGEMMTREF RAGEEEPSEL EMLCIEAKRL TTEQDVLSPK SDGEGETEFQ FDIDYNELDS VYGSETETDE FFAKNPFSNG
501: RSSLGELKES IAEEEEDDEE EAKLTLSLSK LSTSMKNNLS NTMGSGYLKP PKDNQTDKAL VSHKSANVQL PLSVNFVKLA DMKEVEWVVF LERFQELLYS
601: AFAERKTMTL RNTQRLGTSC KF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)