AT1G74180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.733 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 14 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 14 (RLP14); INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 21 (TAIR:AT2G25470.1); Has 116171 Blast hits to 30829 proteins in 1139 species: Archae - 45; Bacteria - 9424; Metazoa - 25371; Fungi - 1311; Plants - 71678; Viruses - 14; Other Eukaryotes - 8328 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27897197..27900908 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 108622.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.77 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||||||||||||||||||||||
| Length | 976 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MERKVFSGQN LIWVMLLLVQ LRGYKCCIEK ERKALLELKK YMISKTADWG LDSVLPTWTN DTKSNCCRWE GLKCNQTSGR IIELSIGQTN FKESSLLNLS 101: LLHPFEELRS LNLSGEIYNE FNGLFDDVEG YESLRRLRNL EILDLSSNSF NNSIFPFLNA ATSLTTLFIQ SNYIGGPLPI KELKNLTKLE LLDLSRSGYN 201: GSIPEFTHLE KLKALDLSAN DFSSLVELQE LKVLTNLEVL GLAWNHLDGP IPKEVFCEMK NLRQLDLRGN YFEGQLPVCL GNLNKLRVLD LSSNQLSGNL 301: PASFNSLESL EYLSLSDNNF EGFFSLNPLA NLTKLKVFRL SSTSEMLQVE TESNWLPKFQ LTVAALPFCS LGKIPNFLVY QTNLRLVDLS SNRLSGDIPT 401: WLLENNPELK VLQLKNNSFT IFQIPTIVHK LQVLDFSAND ITGVLPDNIG HVLPRLLHMN GSHNGFQGNL PSSMGEMNDI SFLDLSYNNF SGELPRSLLT 501: GCFSLITLQL SHNSFSGPIL PIQTRLTSLI VLRMHNNLFT GEIGVGLRTL VNLSIFDASN NRLTGLISSS IPPDSSHLIM LLLSNNLLEG TLPPSLLAIH 601: HLNFLDLSGN LLSGDLPSSV VNSMYGIKIF LHNNSFTGPL PVTLLENAYI LDLRNNKLSG SIPQFVNTGK MITLLLRGNN LTGSIPRKLC DLTSIRLLDL 701: SDNKLNGVIP PCLNHLSTEL GEGIGLSGFS QEISFGDSLQ MEFYRSTFLV DEFMLYYDST YMIVEIEFAA KQRYDSFSGG TLDYMYGLDL SSNELSGVIP 801: AELGDLSKLR ALNLSRNLLS SSIPANFSKL KDIESLDLSY NMLQGNIPHQ LTNLTSLAVF NVSFNNLSGI IPQGGQFNTF NDNSYLGNPL LCGTPTDRSC 901: EGKKNTKEAD NGGEEEEEDD DDEAAIDMVV LYWTTGSTYA IALIGILVLM CFDCPWRRTW LCIVDAFIAS GKSMFS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)