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AT1G74120.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Mitochondrial transcription termination factor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 15 (TAIR:AT5G54180.1); Has 926 Blast hits to 761 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 888; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XT49eggNOG:KOG1267EMBL:AC016662EMBL:AC079678
EMBL:AK228001EMBL:CP002684EnsemblPlants:AT1G74120EnsemblPlants:AT1G74120.1
entrez:843752GeneID:843752GO:GO:0000394GO:GO:0003690
GO:GO:0003723GO:GO:0005739GO:GO:0006355Gramene:AT1G74120.1
hmmpanther:PTHR13068hmmpanther:PTHR13068:SF23HOGENOM:HOG000006334InterPro:IPR003690
KEGG:ath:AT1G74120OMA:KLRVDCLPfam:PF02536PhylomeDB:Q9C6A1
PIR:C96769Proteomes:UP000006548RefSeq:NP_565080.1SMART:SM00733
STRING:3702.AT1G74120.1TAIR:AT1G74120UniGene:At.66135UniProt:Q9C6A1
Coordinates (TAIR10) chr1:-:27871923..27873260
Molecular Weight (calculated) 51034.20 Da
IEP (calculated) 10.14
GRAVY (calculated) -0.08
Length 445 amino acids
Sequence (TAIR10)
(BLAST)
001: MASKLKTFIN LRDYPITLFN QIRSLSSRIL TPINQSHYRK RILLANLLQR YGFPPSSLQH FLSRNNHLLN SDLVETEISL GILLSLKIPQ KSLVSLISDC
101: PNVLRSEFLR KWRVPLSNCG KHGVVSSSAI KSVLEHSSRI GIGPDKFNEC VRVLKSLGFC DSTVSRILSS FPGVLLVNEI EIRRKIEFLV GIGIARDNIE
201: RFFHVFPEVL GIGTETRLKP LLDEFMKMGF SKDDVKKEIA REPRVLGLEL GELPRCLELI NTLKCREVIR VSIISEGAFR AGFEVKLRVD CLCKYGLIRR
301: DAFKVVWKEP RVILYEIEDI EKKIEFLTNR MGFHINCLAD VPEYLGVNLQ KQIVPRYNVI DYLKLKGGLG CDIGLKGLIK PSMKRFYNLY VMPYPECERI
401: FGKRKENVRV NKRHPAGLWK LMKPPSNLTT KEDVQNMKSF IESLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)