AT3G61010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.521 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ferritin/ribonucleotide reductase-like family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ferritin/ribonucleotide reductase-like family protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: oxidation reduction, cellular iron ion homeostasis, iron ion transport; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 85 (TAIR:AT3G11040.1); Has 1243 Blast hits to 1221 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 897; Fungi - 1; Plants - 321; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:22571749..22574179 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48907.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.09 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||
| Length | 427 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLLYLLKRNN VSAAMFAPGW VYETAQQPNF NSAQNKWWSL VEKSCGIVQT IHKSSLFTRI SIRALVTMFH SKVSNSQIVA FSFILHRCPM VQHFCQSLQP 101: LLELNEDNKD VIQATLDTRE ASFNGGDYIT FRGKLEGDAY FTTRLFKSHL HLSSSPITIS FSVTSDETSK HGILLSFSSP SHETKSILVS RQESICRFNN 201: MFLQCLATSA QTVSEWTVQE TSLVLDDHVQ YQQKPETLLP ASPLVIEAHN MELVPGYSGS KSLRVKLEWR QKDLEDSAFP RYNVYAENVK STDLRPRKVL 301: EKPRSETVFL GVAHVPSYYI AELVVESDVK GVRFVFKPVL KMLRFTYHGG AGRNRNCHFL LSMILLVGID VEYNVSYVYH ALDAYIERDN VGLKGFTKFF 401: NDSSLEERGY AEKFMEYQMH CLRWSLH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)