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AT1G73690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cyclin-dependent kinase D1;1
Curator
Summary (TAIR10)
cyclin dependent kinase activator CDKD;1. Nuclear localization. Involved in cell cycle regulation and cell differentiation.
Computational
Description (TAIR10)
cyclin-dependent kinase D1;1 (CDKD1;1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: cell differentiation, regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: shoot apex, embryo, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase D1;3 (TAIR:AT1G18040.1); Has 124523 Blast hits to 123026 proteins in 4314 species: Archae - 100; Bacteria - 13897; Metazoa - 46445; Fungi - 12747; Plants - 30524; Viruses - 425; Other Eukaryotes - 20385 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G73690-MONOMERBioGrid:28923EC:2.7.11.22EC:2.7.11.23
eggNOG:ENOG410XQDHeggNOG:KOG0659EMBL:AB047275EMBL:AC012679
EMBL:AY063843EMBL:AY091227EMBL:CP002684EnsemblPlants:AT1G73690
EnsemblPlants:AT1G73690.1entrez:843704GeneID:843704Genevisible:Q9C9U2
GO:GO:0004693GO:GO:0005524GO:GO:0005634GO:GO:0008353
GO:GO:0030154GO:GO:0051726Gramene:AT1G73690.1hmmpanther:PTHR24056
hmmpanther:PTHR24056:SF0HOGENOM:HOG000233024InParanoid:Q9C9U2IntAct:Q9C9U2
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441
KEGG:ath:AT1G73690KO:K02202OMA:HDGQAPMPaxDb:Q9C9U2
Pfam:PF00069Pfam:Q9C9U2Pfscan:PS50011PhylomeDB:Q9C9U2
PIR:A96764PRIDE:Q9C9U2PRO:PR:Q9C9U2PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9C9U2Proteomes:UP000006548
Reactome:R-ATH-113418Reactome:R-ATH-5696395Reactome:R-ATH-674695Reactome:R-ATH-6781823
Reactome:R-ATH-6782135Reactome:R-ATH-6782210Reactome:R-ATH-69273Reactome:R-ATH-69656
Reactome:R-ATH-72086Reactome:R-ATH-73776Reactome:R-ATH-73779Reactome:R-ATH-75953
Reactome:R-ATH-76042Reactome:R-ATH-77075RefSeq:NP_177510.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9C9U2STRING:3702.AT1G73690.1
SUPFAM:SSF56112TAIR:AT1G73690tair10-symbols:AT;CDKD;1tair10-symbols:CAK3AT
tair10-symbols:CDKD1;1UniGene:At.17996UniProt:Q9C9U2
Coordinates (TAIR10) chr1:+:27715113..27717018
Molecular Weight (calculated) 45140.80 Da
IEP (calculated) 9.90
GRAVY (calculated) -0.38
Length 398 amino acids
Sequence (TAIR10)
(BLAST)
001: MEQPKKVADR YLKREVLGQG TYGVVFKATD TKNGETVAIK KIRLGKEKEG VNVTALREIK LLKELKHPHI IELIDAFPHK ENLHIVFEFM ETDLEAVIRD
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)