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AT1G47210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cyclin-dependent protein kinase 3;2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cyclin-dependent protein kinase 3;2 (CYCA3;2); CONTAINS InterPro DOMAIN/s: G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: Cyclin A3;1 (TAIR:AT5G43080.1); Has 3166 Blast hits to 3165 proteins in 336 species: Archae - 0; Bacteria - 0; Metazoa - 1525; Fungi - 500; Plants - 703; Viruses - 27; Other Eukaryotes - 411 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5024eggNOG:KOG0654EMBL:CP002684EnsemblPlants:AT1G47210
EnsemblPlants:AT1G47210.1entrez:841124ExpressionAtlas:F4HT55Gene3D:1.10.472.10
GeneID:841124GO:GO:0016301Gramene:AT1G47210.1InterPro:IPR006671
InterPro:IPR013763PaxDb:F4HT55Pfam:PF00134PRIDE:F4HT55
ProteinModelPortal:F4HT55Proteomes:UP000006548RefSeq:NP_564500.1SMR:F4HT55
STRING:3702.AT1G47210.2SUPFAM:SSF47954TAIR:AT1G47210tair10-symbols:CYCA3;2
UniGene:At.28294UniProt:F4HT55
Coordinates (TAIR10) chr1:+:17301036..17301695
Molecular Weight (calculated) 21560.30 Da
IEP (calculated) 9.84
GRAVY (calculated) -0.38
Length 192 amino acids
Sequence (TAIR10)
(BLAST)
001: MTEQEICVRV TRAAAKRKAS TAMGIDGDRV NKKRVVLGEL LNVSNVNLLA NLNQKKETQK PKRNLKPPPA KQIKSAPVAI IDLESKSDID SRSDDPQMCG
101: PYVADIYEYL RQLEVKPKQR PLPDYIEKVQ KDVTPSMRGV LVDWLVEVAE EYKLGSETLY LTVSHIDRFL SLKTVNKQKL QLVGVSAMLI AS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)