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AT1G73680.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.634
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha dioxygenase
Curator
Summary (TAIR10)
Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.
Computational
Description (TAIR10)
alpha dioxygenase (ALPHA DOX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Haem peroxidase, animal (InterPro:IPR002007); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G01420.1); Has 1634 Blast hits to 1495 proteins in 223 species: Archae - 0; Bacteria - 102; Metazoa - 1237; Fungi - 165; Plants - 68; Viruses - 3; Other Eukaryotes - 59 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1185-MONOMEREC:1.14.99.-eggNOG:ENOG410XPZ3eggNOG:KOG2408
EMBL:AC012679EMBL:AY081283EMBL:AY128743EMBL:CP002684
EnsemblPlants:AT1G73680EnsemblPlants:AT1G73680.1entrez:843703Gene3D:1.10.640.10
GeneID:843703Genevisible:Q9C9U3GO:GO:0004601GO:GO:0006979
GO:GO:0020037GO:GO:0031408GO:GO:0046872GO:GO:0051213
gramene_pathway:1.13.11.-gramene_pathway:PWY-2501hmmpanther:PTHR11903hmmpanther:PTHR11903:SF12
HOGENOM:HOG000080263InParanoid:Q9C9U3InterPro:IPR010255InterPro:IPR019791
KEGG:ath:AT1G73680OMA:DRHFPEMPaxDb:Q9C9U3PeroxiBase:3378
Pfam:PF03098Pfam:Q9C9U3Pfscan:PS50292PhylomeDB:Q9C9U3
PIR:H96763PRIDE:Q9C9U3PRO:PR:Q9C9U3PROSITE:PS50292
ProteinModelPortal:Q9C9U3Proteomes:UP000006548RefSeq:NP_001185393.1RefSeq:NP_177509.1
SMR:Q9C9U3STRING:3702.AT1G73680.2SUPFAM:SSF48113TAIR:AT1G73680
tair10-symbols:ALPHA DOX2UniGene:At.19772UniProt:Q9C9U3
Coordinates (TAIR10) chr1:-:27704221..27707417
Molecular Weight (calculated) 72461.60 Da
IEP (calculated) 6.77
GRAVY (calculated) -0.38
Length 631 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFSPSSSWF LHPQLHHVVS KMSYFDAFLF YIVHLVDKLG LWHRFPVLLG VAYLGLRRHL HQRYNLVHVG PINGQGYDTD EFCYRTADGK CNHPSDNTIG
101: SQGSFIGRNM PPSTSQYGIL DPHPSVVATK LLARKRFIDN GDQFNVIACS WIQFMIHDWV DHLEDTHQIE LEAPEEVASG CPLKSFKFLR TKKVPTDDHH
201: KSGAVNTRTP WWDGSVIYGN DETGMRRVRV FKDGKLKISG DGLLERDERG VPISGDIRNS WSGFSLLQAL FVKEHNSVCD MLKERYPDFD DEKLYRTARL
301: VTAAVIAKVH TIDWTIELLK TDTLTAGMRI NWYGFFGKKV KDMVGARFGP LFSGLVGLKK PNDHGVPYSL TEEFVSVYRM HCLLPETLIL RDMNSENVDK
401: ENPAIEREIP MTELIGKKAG EKASKLGFEQ LLVSMGHQSC GALTLWNYPN WMRNLVAQDI DGEDRPHLID MAALEIYRDR ERGVPRYNEF RKNLLMSPIS
501: KWEELTDDEE AIKVLREVYE DDIEKLDLNV GLHAEKKIKG FAISETAFFI FLLVASRRLE ADRFFTTNFN EKTYTKEGLE WVNTTETLKD VIDRHFPRLT
601: DQWMRCSSAF SVWGSDPNPK NWVPLYLRSA P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)